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Protein Alignment SNRPG and lsm6
DIOPT Version :10
| Sequence 1: | NP_573139.1 |
Gene: | SNRPG / 32636 |
FlyBaseID: | FBgn0261791 |
Length: | 76 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_005160025.1 |
Gene: | lsm6 / 415167 |
ZFINID: | ZDB-GENE-040625-50 |
Length: | 90 |
Species: | Danio rerio |
| Alignment Length: | 76 |
Identity: | 21/76 - (27%) |
| Similarity: | 40/76 - (52%) |
Gaps: | 1/76 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSKAHPPE-VKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIRG 64
:.|..|.: :|:.:.:.:::|||.|....|:|...|.:||:.::.|.|......||..|...:||
Zfish 13 LRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKYGDAFLRG 77
Fly 65 NSIVMVEALDR 75
|:::.:....|
Zfish 78 NNVLYISTQKR 88
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SNRPG | NP_573139.1 |
Sm_G |
5..74 |
CDD:212466 |
19/69 (28%) |
| lsm6 | XP_005160025.1 |
LSm6 |
17..84 |
CDD:212473 |
19/66 (29%) |
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