Protein Alignment SNRPG and Lsm1

DIOPT Version :10

• Sequence 1: NP_573139.1
• Gene: SNRPG / 32636
• FlyBaseID: FBgn0261791
• Length: 76
• Species: Drosophila melanogaster
• Sequence 2: NP_001102346.1
• Gene: Lsm1 / 364624
• RGDID: 1304967
• Length: 133
• Species: Rattus norvegicus
• Alignment Length: 65
• Identity: 24/65 - (36%)
• Similarity: 38/65 - (58%)
• Gaps: 3/65 - (4%)

  Fly    13 MDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTK-NNI--GMVVIRGNSIVMVEALD 74
            :||:.::.|..||.:.|.||..|.|.|:||..|||......| .:|  |:.|:||.::|::..:|
  Rat    14 IDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIPRGIFVVRGENVVLLGEID 78

  Fly    75  74
              Rat    79  78

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SNRPG	NP_573139.1	Sm_G	5..74	CDD:212466	23/63 (37%)
Lsm1	NP_001102346.1	LSm1	4..77	CDD:212475	23/62 (37%)
		PRK10788	<64..131	CDD:182731	5/15 (33%)