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Protein Alignment SNRPG and Lsm7
DIOPT Version :10
| Sequence 1: | NP_573139.1 |
Gene: | SNRPG / 32636 |
FlyBaseID: | FBgn0261791 |
Length: | 76 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001388005.1 |
Gene: | Lsm7 / 362829 |
RGDID: | 1305354 |
Length: | 109 |
Species: | Rattus norvegicus |
| Alignment Length: | 71 |
Identity: | 29/71 - (40%) |
| Similarity: | 45/71 - (63%) |
Gaps: | 8/71 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKD--------NTKNNIGMVVIRG 64
::.||:||.:.:|..|||..:|||:||||.:|:|||.|:|..:| .....:|:||.||
Rat 20 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRG 84
Fly 65 NSIVMV 70
.|:|::
Rat 85 TSVVLI 90
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SNRPG | NP_573139.1 |
Sm_G |
5..74 |
CDD:212466 |
29/71 (41%) |
| Lsm7 | NP_001388005.1 |
LSm7 |
17..103 |
CDD:212476 |
29/71 (41%) |
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