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Protein Alignment SNRPG and snr-5
DIOPT Version :10
| Sequence 1: | NP_573139.1 |
Gene: | SNRPG / 32636 |
FlyBaseID: | FBgn0261791 |
Length: | 76 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_498708.1 |
Gene: | snr-5 / 176103 |
WormBaseID: | WBGene00004918 |
Length: | 85 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 78 |
Identity: | 23/78 - (29%) |
| Similarity: | 40/78 - (51%) |
Gaps: | 4/78 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSKAHPPEVKKYMD----KRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVV 61
||...|...|.::: |.::.||..|....|:|...|.:||:.|....|....|::.|:|.::
Worm 1 MSAVQPVNPKPFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYIDGNSQGNLGEIL 65
Fly 62 IRGNSIVMVEALD 74
||.|:::.|..:|
Worm 66 IRCNNVLYVGGVD 78
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SNRPG | NP_573139.1 |
Sm_G |
5..74 |
CDD:212466 |
20/72 (28%) |
| snr-5 | NP_498708.1 |
Sm_F |
8..76 |
CDD:212469 |
19/67 (28%) |
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