DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SNRPG and snrpg

DIOPT Version :10

Sequence 1:NP_573139.1 Gene:SNRPG / 32636 FlyBaseID:FBgn0261791 Length:76 Species:Drosophila melanogaster
Sequence 2:NP_001165120.1 Gene:snrpg / 100125174 XenbaseID:XB-GENE-5874501 Length:76 Species:Xenopus tropicalis


Alignment Length:76 Identity:53/76 - (69%)
Similarity:64/76 - (84%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKAHPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIRGN 65
            ||||||||:||:|||::.|||||||.|.|||||||||||:|:|:..|......:|.|||||||||
 Frog     1 MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECTEISGGGHQNTIGMVVIRGN 65

  Fly    66 SIVMVEALDRV 76
            ||:|:|||:||
 Frog    66 SIIMLEALERV 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNRPGNP_573139.1 Sm_G 5..74 CDD:212466 46/68 (68%)
snrpgNP_001165120.1 Sm_G 5..74 CDD:212466 46/68 (68%)

Return to query results.
Submit another query.