DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS19a and AT3G02080

DIOPT Version :10

Sequence 1:NP_523376.1 Gene:RpS19a / 32635 FlyBaseID:FBgn0010412 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_186857.1 Gene:AT3G02080 / 821120 AraportID:AT3G02080 Length:143 Species:Arabidopsis thaliana


Alignment Length:136 Identity:73/136 - (53%)
Similarity:95/136 - (69%) Gaps:0/136 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHR 67
            |.||||:..|...||.|..||::||:::|...|||||.|.||||||||||:|:|.||:.|.:|.|
plant     4 GKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLR 68

  Fly    68 SPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLD 132
            ...|||:..:||||.||||..|.|||:::.|.||..||.||...:||....|||:::|.||||||
plant    69 GGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLD 133

  Fly   133 RIANQI 138
            ::|.:|
plant   134 QVAGRI 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS19aNP_523376.1 Ribosomal_S19e 5..139 CDD:460058 72/134 (54%)
AT3G02080NP_186857.1 Ribosomal_S19e 6..142 CDD:460058 72/134 (54%)

Return to query results.
Submit another query.