DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS19a and rps19

DIOPT Version :9

Sequence 1:NP_001285338.1 Gene:RpS19a / 32635 FlyBaseID:FBgn0010412 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_002939172.2 Gene:rps19 / 100379722 XenbaseID:XB-GENE-968799 Length:145 Species:Xenopus tropicalis


Alignment Length:138 Identity:89/138 - (64%)
Similarity:109/138 - (78%) Gaps:0/138 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLY 65
            ||||||||::|....:|:|.||||:||||||:.:|.||.||.|||||.|.:|||.|.||.:||||
 Frog     1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPCDENWFYTRAASTVRHLY 65

  Fly    66 HRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130
            .|..|||||:|||||||:||||.||||.:.:...||:.|||||:.::|||.|:|||||:..||||
 Frog    66 LRGGAGVGSMTKIYGGRQRNGVMPSHFSKGSKSVARRVLQALENLKMVEKDPNGGRKLTPQGQRD 130

  Fly   131 LDRIANQI 138
            |||||.|:
 Frog   131 LDRIAGQV 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS19aNP_001285338.1 Ribosomal_S19e 5..138 CDD:279436 84/132 (64%)
rps19XP_002939172.2 Ribosomal_S19e 5..141 CDD:376455 85/134 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3558
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 185 1.000 Inparanoid score I3815
OMA 1 1.010 - - QHG62169
OrthoDB 1 1.010 - - D1434984at2759
OrthoFinder 1 1.000 - - FOG0001026
OrthoInspector 1 1.000 - - otm48140
Panther 1 1.100 - - LDO PTHR11710
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2775
SonicParanoid 1 1.000 - - X617
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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