DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS19a and LOC100362339

DIOPT Version :9

Sequence 1:NP_001285338.1 Gene:RpS19a / 32635 FlyBaseID:FBgn0010412 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_038952302.1 Gene:LOC100362339 / 100362339 RGDID:2318347 Length:145 Species:Rattus norvegicus


Alignment Length:138 Identity:90/138 - (65%)
Similarity:107/138 - (77%) Gaps:0/138 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLY 65
            ||||||||::|....:|:|.||||:||||||:.:|.||.||.|||||||.:|||.|.||..||||
  Rat     1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLY 65

  Fly    66 HRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130
            .|..|||||:|||||||:||||.||||.|.:...||:.|||||..:::||..||||||:..||||
  Rat    66 LRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMMEKDQDGGRKLTPQGQRD 130

  Fly   131 LDRIANQI 138
            |||||.|:
  Rat   131 LDRIAGQV 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS19aNP_001285338.1 Ribosomal_S19e 5..138 CDD:279436 85/132 (64%)
LOC100362339XP_038952302.1 Ribosomal_S19e 5..141 CDD:395866 86/134 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3457
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130609
Inparanoid 1 1.050 187 1.000 Inparanoid score I3820
OMA 1 1.010 - - QHG62169
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001026
OrthoInspector 1 1.000 - - mtm9051
orthoMCL 1 0.900 - - OOG6_100904
Panther 1 1.100 - - O PTHR11710
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X617
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.970

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