DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mbt and pak1

DIOPT Version :9

Sequence 1:NP_523375.2 Gene:mbt / 32631 FlyBaseID:FBgn0025743 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_021323273.1 Gene:pak1 / 373103 ZFINID:ZDB-GENE-030826-29 Length:587 Species:Danio rerio


Alignment Length:654 Identity:227/654 - (34%)
Similarity:326/654 - (49%) Gaps:159/654 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKKKKKPLISMPSNFEHRVHTGFDKRENKYVGLPLQWASIVGNNQILKSSNRPLPLVDPSEITPT 67
            :|||::|.||:||:|||.:|.|||....::.|:|.|||.::..:.|.|...:.         .|.
Zfish    66 NKKKERPEISLPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKLEQKK---------NPQ 121

  Fly    68 EILD-LKTIVRPHHNNNK-------ADTTSLNSSSTMMMGSMAPMNPMAPGAHPMMSHGPGMMMP 124
            .:|| ||.......:||:       ....:.||||.                             
Zfish   122 AVLDVLKFYDSKETSNNQKYMSFTDKGVENFNSSSA----------------------------- 157

  Fly   125 PETGGIVLPKTSHVARSNSLRSSSPPRVRRVANVPPSVPEEEGPPAAGTPGVGGASSGGFKPPGA 189
                  |:|||.         |.:|    .||.|.....|||.   ..||           ||  
Zfish   158 ------VVPKTV---------SETP----AVATVSEDEDEEED---EATP-----------PP-- 187

  Fly   190 HPSLLYNSQHAHANGATGPLAVRTDQTNLQQYRSNLAPPSGGSMPQQQQTSPVGSVAS--GTRSN 252
                              .:|.|.:.|.....||.:.|.......:...|||:.:.|:  |:.||
Zfish   188 ------------------VIAPRPEHTKSIYTRSVIEPLPPPLSTKDAATSPITNAAADGGSSSN 234

  Fly   253 --HSHTNNGNSGGSYPPMYPTSHQQQQQQQQQAKQGGDQNQNPLHPHAHPHPHHHQHLAKSASRA 315
              .|:||..|:                                                .:.:..
Zfish   235 APSSNTNTTNT------------------------------------------------NTTNTT 251

  Fly   316 SSSSGGASSAAQQASGASGGAAGQPKQDQRLTHEQFRAALQM--------VVSAGDPRENLDHFN 372
            ::::..::|||...:..|........:.::::.|:....|.:        :||.|||::....|.
Zfish   252 NTTNTTSTSAASSTNAPSTPQTTDKSRKKKMSDEEILEKLNVLRSPSAGSIVSVGDPKKKYTRFE 316

  Fly   373 KIGEGSTGTVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYHHPNIVETYSSFLVNDE 437
            |||:|::|||..|.|.:||::||:|:|:|::|.::||:.||:::||:..:||||....|:||.||
Zfish   317 KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 381

  Fly   438 LWVVMEYLEGGALTDIVTHSRMDEEQIATVCKQCLKALAYLHSQGVIHRDIKSDSILLAADGRVK 502
            ||||||||.||:|||:||.:.|||.|||.||::||:||.:||...|||||||||:|||..||.||
Zfish   382 LWVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHCNQVIHRDIKSDNILLGMDGSVK 446

  Fly   503 LSDFGFCAQVSQELPKRKSLVGTPYWMSPEVISRLPYGPEVDIWSLGIMVIEMVDGEPPFFNEPP 567
            |:|||||||::.|..||.::|||||||:|||::|..|||:|||||||||.|||::||||:.||.|
Zfish   447 LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 511

  Fly   568 LQAMRRIRDMQPPNLKNAHKVSPRLQSFLDRMLVRDPAQRATAAELLAHPFLRQAGPPSLLVPLM 632
            |:|:..|.....|.|:|..|:|...:.||:|.|..|..:|.:|.|||.|.||:.|.|.|.|.||:
Zfish   512 LRALYLIATNGTPELQNPEKLSAVFRDFLNRCLEMDVEKRGSAKELLQHQFLKVAKPLSSLTPLI 576

  Fly   633 RNAR 636
            ..|:
Zfish   577 IAAK 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mbtNP_523375.2 CRIB_PAK_like 9..54 CDD:238526 19/44 (43%)
STKc_PAK_II 360..620 CDD:270815 146/259 (56%)
S_TKc 372..619 CDD:214567 140/246 (57%)
pak1XP_021323273.1 PBD 73..130 CDD:307091 23/65 (35%)
PKc_like 283..586 CDD:328722 157/298 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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