DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mbt and Pak3

DIOPT Version :9

Sequence 1:NP_523375.2 Gene:mbt / 32631 FlyBaseID:FBgn0025743 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_008771626.1 Gene:Pak3 / 29433 RGDID:3251 Length:580 Species:Rattus norvegicus


Alignment Length:644 Identity:222/644 - (34%)
Similarity:332/644 - (51%) Gaps:145/644 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKKKKPLISMPSNFEHRVHTGFDKRENKYVGLPLQWASIVGNNQILKSSNRPLPLVDPSEITPTE 68
            |:|::|.||:||:|||.:|.|||....::...|.|             ::||:            
  Rat    63 KEKERPEISLPSDFEHTIHVGFDAVTGEFTNSPFQ-------------TSRPV------------ 102

  Fly    69 ILDLKTIVRPHHNNNKADTTSLNSSSTMMMGSMAPMNPMAPGAHPMMSHGPGMMMPPETGGIVLP 133
                 |:..........|          :.||.     |.||..|     .|:   ||....:| 
  Rat   103 -----TVASSQSEGKLPD----------LYGSQ-----MCPGKLP-----EGI---PEQWARLL- 138

  Fly   134 KTSHVARSNSLRSSSPPRVRRVANVPPSVPEEEGPPAAGTPGVGGASSGGFKPPGAHPSLLYNSQ 198
            :||::.:..  :..:|..|..|..                                    .|:|:
  Rat   139 QTSNITKLE--QKKNPQAVLDVLK------------------------------------FYDSK 165

  Fly   199 HAHANGATGPLAVRTDQTNLQQYRSNLAPPSGGSMPQQQQTSPVGSVASGTRSNH----SHTNNG 259
                           :..|.|:|.                     |..||.:|.|    :|.:|.
  Rat   166 ---------------ETVNNQKYM---------------------SFTSGDKSAHGYIAAHQSNT 194

  Fly   260 NSGGSYPPMYPTSHQQQQQQQQQAKQGGDQNQNPLHPHAHPHPHHHQHL-AKSASRASSSSGGAS 323
            .: .|.||:.|...:::.:::::.:   |.|:.|  |...|.|.|.:.: .:|...:.:|....:
  Rat   195 KT-ASEPPLAPPVSEEEDEEEEEEE---DDNEPP--PVIAPRPEHTKSIYTRSVVESIASPAAPN 253

  Fly   324 SAAQQASGASGGAA------GQPKQDQRLTHEQFRAALQMVVSAGDPRENLDHFNKIGEGSTGTV 382
            ..|...|..:..::      .:.::..::|.|:....|:.:||.|||::....|.|||:|::|||
  Rat   254 KEATPPSAENANSSTLYRNTDRQRKKSKMTDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTV 318

  Fly   383 CIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYHHPNIVETYSSFLVNDELWVVMEYLEG 447
            ..|.|.:||::||:|:|:|::|.::||:.||:::||:..:||||....|:||.||||||||||.|
  Rat   319 YTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 383

  Fly   448 GALTDIVTHSRMDEEQIATVCKQCLKALAYLHSQGVIHRDIKSDSILLAADGRVKLSDFGFCAQV 512
            |:|||:||.:.|||.|||.||::||:||.:|||..|||||||||:|||..||.|||:|||||||:
  Rat   384 GSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 448

  Fly   513 SQELPKRKSLVGTPYWMSPEVISRLPYGPEVDIWSLGIMVIEMVDGEPPFFNEPPLQAMRRIRDM 577
            :.|..||.::|||||||:|||::|..|||:|||||||||.||||:||||:.||.||:|:..|...
  Rat   449 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN 513

  Fly   578 QPPNLKNAHKVSPRLQSFLDRMLVRDPAQRATAAELLAHPFLRQAGPPSLLVPLMRNAR 636
            ..|.|:|..::|...:.||:|.|..|..:|.:|.|||.||||:.|.|.|.|.||:..|:
  Rat   514 GTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLILAAK 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mbtNP_523375.2 CRIB_PAK_like 9..54 CDD:238526 14/44 (32%)
STKc_PAK_II 360..620 CDD:270815 148/259 (57%)
S_TKc 372..619 CDD:214567 142/246 (58%)
Pak3XP_008771626.1 PBD 69..162 CDD:395634 32/184 (17%)
STKc_PAK3 284..580 CDD:132987 159/289 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0578
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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