DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mbt and pak3

DIOPT Version :9

Sequence 1:NP_523375.2 Gene:mbt / 32631 FlyBaseID:FBgn0025743 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_004916907.1 Gene:pak3 / 100495025 XenbaseID:XB-GENE-961764 Length:556 Species:Xenopus tropicalis


Alignment Length:633 Identity:221/633 - (34%)
Similarity:314/633 - (49%) Gaps:147/633 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKKKKPLISMPSNFEHRVHTGFDKRENKYVGLPLQWASIVGNNQILKSSNRPLPLVDPSEITPTE 68
            |:|::|.||:||:|||.:|.|||....::.|:|.|||.::..:.|.|...:.         .|..
 Frog    63 KEKERPEISLPSDFEHTIHVGFDAVTGEFTGIPEQWARLLQTSNITKLEQKK---------NPQA 118

  Fly    69 ILDLKTIVRPHHNNNKADTTSLNSSSTMMMGSMAPMNPMAPGAHPMMSHGPGMMMPPETGGIVLP 133
            :||:..........|.....|..|......|.:|        ||.:.                  
 Frog   119 VLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIA--------AHSLF------------------ 157

  Fly   134 KTSHVARSNSLRSSSPPRVRRVANVPPSVPEEEGPPAAGTPGVGGASSGGFKPPGAHPSLLYNSQ 198
             .|||.: |:..:|.||       :.|.|.|||...                          ..:
 Frog   158 -LSHVLQ-NAKTASEPP-------LAPPVSEEEDEE--------------------------EEE 187

  Fly   199 HAHANGATGPLAVRTDQTNLQQYRSNLAPPSGGSMPQQQQTSPVGSVASGTRSNHSHTNNGNSGG 263
            ....|.....:|.|.:.|.....||.:.|.:..:..::..||||          .....|.||..
 Frog   188 EEDDNEPPPVIAPRPEHTKSIYTRSVIEPVALTAPAKEASTSPV----------TPQPENSNSST 242

  Fly   264 SYPPMYPTSHQQQQQQQQQAKQGGDQNQNPLHPHAHPHPHHHQHLAKSASRASSSSGGASSAAQQ 328
            |      |.::...:|::::|                                            
 Frog   243 S------TLYRNTDRQRKKSK-------------------------------------------- 257

  Fly   329 ASGASGGAAGQPKQDQRLTHEQFRAALQMVVSAGDPRENLDHFNKIGEGSTGTVCIATDKSTGRQ 393
                             :|.|:....|:.:||.|||::....|.|||:|::|||..|.|.:||::
 Frog   258 -----------------MTDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQE 305

  Fly   394 VAVKKMDLRKQQRRELLFNEVVIMRDYHHPNIVETYSSFLVNDELWVVMEYLEGGALTDIVTHSR 458
            ||:|:|:|::|.::||:.||:::||:..:||||....|:||.||||||||||.||:|||:||.:.
 Frog   306 VAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 370

  Fly   459 MDEEQIATVCKQCLKALAYLHSQGVIHRDIKSDSILLAADGRVKLSDFGFCAQVSQELPKRKSLV 523
            |||.|||.||::||:||.:|||..|||||||||:|||..||.|||:|||||||::.|..||.::|
 Frog   371 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 435

  Fly   524 GTPYWMSPEVISRLPYGPEVDIWSLGIMVIEMVDGEPPFFNEPPLQAMRRIRDMQPPNLKNAHKV 588
            ||||||:|||::|..|||:|||||||||.||||:||||:.||.||:|:..|.....|.|:|..::
 Frog   436 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERL 500

  Fly   589 SPRLQSFLDRMLVRDPAQRATAAELLAHPFLRQAGPPSLLVPLMRNAR 636
            |...:.||:|.|..|..:|.:|.|||.||||:.|.|.|.|.||:..|:
 Frog   501 SAIFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAK 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mbtNP_523375.2 CRIB_PAK_like 9..54 CDD:238526 19/44 (43%)
STKc_PAK_II 360..620 CDD:270815 148/259 (57%)
S_TKc 372..619 CDD:214567 142/246 (58%)
pak3XP_004916907.1 PBD 69..124 CDD:279166 21/63 (33%)
STKc_PAK3 260..556 CDD:132987 159/289 (55%)
S_TKc 280..531 CDD:214567 143/250 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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