DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup153 and POM121L12

DIOPT Version :10

Sequence 1:NP_001097002.1 Gene:Nup153 / 32630 FlyBaseID:FBgn0061200 Length:1929 Species:Drosophila melanogaster
Sequence 2:NP_872401.3 Gene:POM121L12 / 285877 HGNCID:25369 Length:296 Species:Homo sapiens


Alignment Length:312 Identity:56/312 - (17%)
Similarity:98/312 - (31%) Gaps:94/312 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   823 ANPQPAAPIVNFAANG-----NVSAISKPSKRTFTFSEPTPLSNFQENCIPKPKINRK----YTF 878
            |.|..:|.:.||...|     ...|::.|..|:.:..:.||....:::..|...:.:.    :.:
Human     4 AAPAESADLGNFWKAGEPLLQGPDALAAPMSRSPSTPQTTPSPQGRQSPWPLRSLTQSHIQYFQW 68

  Fly   879 SAPAP---LDDLRITNKQSQP----------------TINGTPSSKEWE-C---DTCMVRNKPEI 920
            ..|.|   |.::|.|...::|                |..|...|..|| |   ..|...|....
Human    69 GRPVPSTHLIEVRPTQDPAKPQRVVSEGWRRPALPGETALGRDLSCAWEGCMKGGLCRAWNPGRT 133

  Fly   921 NKCVACETAKPVASAAPVQAP--------LPPSTAAID---TQSFVGFGDRFKKSTTAWECDACM 974
            ...|....|.|....:|.::|        .|.:...:|   .::.:|...:..|.:..::.....
Human   134 WSPVTIGIAPPERQESPWRSPGQRARPAGRPAAQELLDPCTRETLLGALSQCPKGSARFDGPLWF 198

  Fly   975 LSNKAEASKCIACETPRKTVAPKVNNFSPLITNA--------------KSNEWECSVCLVRNKVE 1025
            ..:.::..        |:.:.|:.:.|.||..|.              ....|..|.        
Human   199 EVSDSKGG--------RRNLQPRPSAFKPLSKNGAVASFVPRPGPLKPSLGPWSLSF-------- 247

  Fly  1026 VSKCVACESAKPGATMALPATSNIAVATPSIITDGFGDRFKKSATAWECDAC 1077
                  |:.|.| :.:..||        ||.|.|.:      .||...|.:|
Human   248 ------CDDAWP-SVLVQPA--------PSAIWDFW------EATTPSCGSC 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup153NP_001097002.1 RanBP2-type Zn finger 864..883 CDD:275375 2/22 (9%)
zf-RanBP 903..931 CDD:395516 8/31 (26%)
RanBP2-type Zn finger 907..926 CDD:275375 6/22 (27%)
zf-RanBP 968..992 CDD:395516 0/23 (0%)
RanBP2-type Zn finger 968..987 CDD:275375 0/18 (0%)
zf-RanBP 1009..1038 CDD:395516 4/28 (14%)
RanBP2-type Zn finger 1013..1032 CDD:275375 2/18 (11%)
zf-RanBP 1072..1097 CDD:395516 2/6 (33%)
RanBP2-type Zn finger 1072..1091 CDD:275375 2/6 (33%)
zf-RanBP 1126..1155 CDD:395516
RanBP2-type Zn finger 1130..1149 CDD:275375
ZnF_RBZ 1239..1261 CDD:197784
RanBP2-type Zn finger 1241..1260 CDD:275375
POM121L12NP_872401.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 11/49 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..162 4/19 (21%)
POM121 193..>240 CDD:464572 6/54 (11%)
Blue background indicates that the domain is not in the aligned region.

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