Sequence 1: | NP_001097002.1 | Gene: | Nup153 / 32630 | FlyBaseID: | FBgn0061200 | Length: | 1929 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593213.1 | Gene: | nup124 / 2542254 | PomBaseID: | SPAC30D11.04c | Length: | 1159 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 1589 | Identity: | 347/1589 - (21%) |
---|---|---|---|
Similarity: | 506/1589 - (31%) | Gaps: | 609/1589 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 480 RRRFNASIYGSTSALSDSRLLSGSAS---NSGSASASS------SPFYQGRT------------- 522
Fly 523 TFGG-------NSGNNR-------------LFSR------SNLSSSAASSMLGLNSAGSSPAHQL 561
Fly 562 HASMTGGIGYGMKAVDMRPSDSGSLAETSVGQGGSKKPGTGLSNTTMRILNLLESYST------- 619
Fly 620 ----PLIDAKRMGSSIKEHQSSRQQRQGTPATPYLRSTSASRN-------VSVPNHI--NELAEL 671
Fly 672 RSNKLLVPTMQQLLERRRLHRVTQNSRDVVHSQNVRAGGENNQEKPKPTAPYVAPIDQSANHTQH 736
Fly 737 TNKMRSRLSHQTRNKETRTAEEEAPPPLDLPQI----------SFPDMASAPKFDLIIKPTVPVV 791
Fly 792 SKPSTTDPIQSSKSSNTNLSTTNSKQMPNFLANPQPAAPIVNFAANGNVSAISKPSKRTFTFSEP 856
Fly 857 TPLSNFQENCIPKPKINRKYTFSAPAPLDD-LRITNKQSQPTINGTPSSKEWECDTCMVRNKPEI 920
Fly 921 NKCVACETAKPVASAAPVQAPLPPSTAAIDTQSFVGFGDRFKKSTTAWECDACMLSNKAEASKCI 985
Fly 986 ACETPRKTVAPKVNNFSPLIT------NAKSNEWECSVCLVRNKVEVSKCVACESAKPGATMALP 1044
Fly 1045 ATSNIAVATPSIITDGFGDRFKKSATAWECDACMLSNKAEASKCIACETPRKSSTPIANSSYPSI 1109
Fly 1110 NNNLPAGSGFDISFTRKANMWECQTC------LVMNKSSDEECIACQT-----------PNSQAR 1157
Fly 1158 NSNSESALISSISSSSASFSGSLSRPSSRSSSGSTSTCGSVCSGSIVSISSTTESAKALSAKKVP 1222
Fly 1223 PKPDAGFQQLVAAQKTSTWECEACLAKNDMSRKTCICCEQMMPEAFNPAATTANSAASSVPKFRF 1287
Fly 1288 GFSHVKEVVKPSVETTTTPAPTSAQFSFGFGQSNQGKDVADSKKTEAP-KTFMFGVSKVEEPKTV 1351
Fly 1352 SFGTGIKETTATSSTEATAPTPAAAAPAPVQFVFKAPTTATTASSLTTTISTTSNAPALGGFSFG 1416
Fly 1417 AP-------SSSSTVSSSTTSTSANPAAVKPMFSWSGAGSAVSSTSSSQQPVAKAPTLGFGVSSS 1474
Fly 1475 TVTTTTTSTKVFAFTPASGLDPAAATSAPAAGAGFSFGSQSKPATTQNTGTFFFGQPTAVAPATP 1539
Fly 1540 TNPSVSSIFGAPATSTTASTSVSATTSTSTANAIASSFAPTSTPQLFGNWGEKKTDLTTFGASSG 1604
Fly 1605 SGTTTTPSFGWSSNGDAAK-SNSAAVGSAAVPSSSASTMATP----IFGSSSMFGPSSSSNNTTS 1664
Fly 1665 TSTTSLPFGSAATTAATTPAGGNAALTGLFGNVGNSLAGVGAPVATTPAATAA--APLTNIFG-- 1725
Fly 1726 ---------NPTPVAAAAPVFGSGSTIPSAG------FGA-----PAAAAPLAAPALPGAFNFGG 1770
Fly 1771 ATAATPAASSAPFVFGSSTNEPLAKP---SFNFTGSAASSTAPAPAFNFTANTAATNNPSGG-DS 1831
Fly 1832 HPRIFQFGSSQPAANNQFGGAGGATNNSAGGMPMFNFSPGAPQMQSTPNANALFQFSATSTAPAN 1896
Fly 1897 IFAFNPPAAGNSAQSSQTARRKIRAPVRR 1925 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup153 | NP_001097002.1 | Nup153 | <458..910 | CDD:285770 | 98/508 (19%) |
RanBP2-type Zn finger | 864..883 | CDD:275375 | 3/18 (17%) | ||
zf-RanBP | 903..931 | CDD:279035 | 5/27 (19%) | ||
RanBP2-type Zn finger | 907..926 | CDD:275375 | 2/18 (11%) | ||
zf-RanBP | 968..992 | CDD:279035 | 1/23 (4%) | ||
RanBP2-type Zn finger | 968..987 | CDD:275375 | 0/18 (0%) | ||
zf-RanBP | 1009..1038 | CDD:279035 | 4/28 (14%) | ||
RanBP2-type Zn finger | 1013..1032 | CDD:275375 | 0/18 (0%) | ||
zf-RanBP | 1072..1097 | CDD:279035 | 6/24 (25%) | ||
RanBP2-type Zn finger | 1072..1091 | CDD:275375 | 4/18 (22%) | ||
zf-RanBP | 1126..1155 | CDD:279035 | 5/45 (11%) | ||
RanBP2-type Zn finger | 1130..1149 | CDD:275375 | 3/24 (13%) | ||
ZnF_RBZ | 1239..1261 | CDD:197784 | 1/21 (5%) | ||
RanBP2-type Zn finger | 1241..1260 | CDD:275375 | 1/18 (6%) | ||
nup124 | NP_593213.1 | Nup_retrotrp_bd | 1072..1158 | CDD:287557 | 32/107 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR23193 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |