DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup153 and Pom121l2

DIOPT Version :9

Sequence 1:NP_001097002.1 Gene:Nup153 / 32630 FlyBaseID:FBgn0061200 Length:1929 Species:Drosophila melanogaster
Sequence 2:NP_001156400.1 Gene:Pom121l2 / 195236 MGIID:2684870 Length:972 Species:Mus musculus


Alignment Length:937 Identity:214/937 - (22%)
Similarity:311/937 - (33%) Gaps:314/937 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1117 SGFDISFTRKANMWECQTCLVMNKSSDEEC-------------IACQTPNSQARNSNSESALISS 1168
            ||..:||..:....:.:..:   :|||::|             |..|.|.|..||:      |:|
Mouse   198 SGATVSFVARPGSLKRRPHV---QSSDDKCKRSGCFSGALVASIHTQGPPSTKRNA------ITS 253

  Fly  1169 ISSSSASFSGSLSR--------------------PSSR-----SSSGSTSTCGSVCSGSIVSISS 1208
            ..|||...|||..|                    |:|.     ||||.       .:|.|..:.|
Mouse   254 SYSSSRELSGSWKRHFLRTLVQTPEWPLKKAGESPNSHLSVTPSSSGQ-------LNGEIPLLQS 311

  Fly  1209 TTESAKALSAKKVPPKPDAGFQQLVAAQKTSTWECEACLAKNDMSRKTCICCEQMMPEAFNPAAT 1273
            .......:..::.|          |..::..|.|.:|                  :|......||
Mouse   312 GPRDLLTIPCQQGP----------VVTEEDPTLEGQA------------------VPSNQTTEAT 348

  Fly  1274 TANSAASSVPKFRFGFSHVKEVVKPSVETTTTPAPTSAQFSFGFGQSNQGKDVADSKKTEAPKTF 1338
            | .:|..|:|:.|.|......:.:.|.|...:              ::....:...|...||   
Mouse   349 T-GTAGDSIPEMRAGIQPTLSLSRSSSERVLS--------------THVNPQLESLKNMPAP--- 395

  Fly  1339 MFGVSKVEEPKTVSFGT--GIKETTATSSTEATAPT--------PAA--AAPAPVQFVFKAPTTA 1391
             .|.|::|..:.:|..:  .|..|.|:.|:..|..|        |.|  :|..|...|.. ||..
Mouse   396 -LGCSQLEHIQGISSDSNPSIASTQASPSSPTTPVTDSTWLSSIPRAHRSAVPPHSSVIN-PTAP 458

  Fly  1392 TTASSLTTTISTTSNAPALGGFSFGAPSSSSTVSSST-----------TSTSANPAAVKPMFSWS 1445
            ||.|:|...:|.    |.|     ..|:|...|.:|:           .||....|:...:   |
Mouse   459 TTQSTLVGVVSN----PIL-----HLPASVLPVETSSHLALRPIWGPVHSTEVRTASYSRI---S 511

  Fly  1446 GAGSAVSSTSSSQQPVAKAPTLG--FGVSSSTVTTTTTSTKVFAFTPASGLDP-------AAATS 1501
            ....|.||:|.|..|....||..  || |...:.|.:.:..|....|:|.|..       :.||:
Mouse   512 VMAEASSSSSPSTTPGILRPTFKPIFG-SIEPLQTMSETAPVHTRQPSSSLSSDSTHLFHSLATT 575

  Fly  1502 APAAGAGFSFGSQSK---------PATTQNT------GTFFFGQPTAVAPAT--------PTNPS 1543
            ||.........|:||         .:||.|:      .||..|.......||        ||.|:
Mouse   576 APCVVTSVIPASKSKDPGVDLNIVTSTTGNSCSVPSCSTFLLGASQNFPSATDLIFPSQHPTIPT 640

  Fly  1544 VS--SIFGAPATSTTASTSVSATTSTSTANAIASSFAPTSTPQLFGNWGEKKTDLTTFGASSGSG 1606
            |.  :||....||   :..:|...||.|...:       |.|            |.|.|.||.:.
Mouse   641 VHTVTIFSQVLTS---AIKISPLRSTDTLKGV-------SNP------------LATLGLSSTNQ 683

  Fly  1607 TTTTPSFGWSSNGDAAKSNSAAVGSA----AVPSSSASTMATP--IFG---SSSMFGPSSSSNNT 1662
            ...|     |||.:...:.::::||:    ..||...::.::|  |.|   ||....|:.|    
Mouse   684 PPVT-----SSNSNVTSALTSSLGSSPKPLLPPSQRNTSQSSPGAIDGLKQSSLQLAPAQS---- 739

  Fly  1663 TSTSTTSLPFGSAATTAA-------TTPAGGNAALTGLFGNVGNSLAGVGAPVATTPAATAAAPL 1720
            .|||..|...|.:.|.:|       |.||.|.  ||.            .||:..|||.:..   
Mouse   740 FSTSFLSENSGVSPTPSAQLVLSKTTQPACGQ--LTS------------SAPIIHTPATSQT--- 787

  Fly  1721 TNIFGNPTPVAAAAPVFGSGSTIPSAGFGAPAAAAPLAAPALPGAFNFGGATAATPAASSA--PF 1783
                             |.|||:....||..::.|......     |....|.::...|:|  ||
Mouse   788 -----------------GFGSTLAGFPFGKASSTALRVIRQ-----NHQSVTYSSVFGSTAPRPF 830

  Fly  1784 VFGS-----STNEP---LAKPSFNFTGSAASSTAPAPAFNFTANTAATNNPSGGDSHPRIFQFGS 1840
            .||.     ...||   :|.|..:.:|:..|         .|.:|.|          |.:..:..
Mouse   831 AFGGLVMPMDCGEPEVIVAAPKRSTSGTRQS---------MTPSTLA----------PFVQCWNQ 876

  Fly  1841 SQPAANNQFGGAGGATNNSAGGMPMFNFSPGAPQMQSTPNANALFQFSATSTAPANIFAFNPPAA 1905
            |.....||.        ....|:|......|||         :|..|:.:...|..|      .|
Mouse   877 SMQGPPNQI--------TPLAGIPARKIMSGAP---------SLVPFAQSIPVPGAI------KA 918

  Fly  1906 GNS---AQSSQTARRKI-RAPVRRLPP 1928
            |:|   ..||.|.:..: |.|:|.|.|
Mouse   919 GSSLGFGMSSPTVQGSVGRNPLRSLEP 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup153NP_001097002.1 Nup153 <458..910 CDD:285770
RanBP2-type Zn finger 864..883 CDD:275375
zf-RanBP 903..931 CDD:279035
RanBP2-type Zn finger 907..926 CDD:275375
zf-RanBP 968..992 CDD:279035
RanBP2-type Zn finger 968..987 CDD:275375
zf-RanBP 1009..1038 CDD:279035
RanBP2-type Zn finger 1013..1032 CDD:275375
zf-RanBP 1072..1097 CDD:279035
RanBP2-type Zn finger 1072..1091 CDD:275375
zf-RanBP 1126..1155 CDD:279035 7/41 (17%)
RanBP2-type Zn finger 1130..1149 CDD:275375 5/31 (16%)
ZnF_RBZ 1239..1261 CDD:197784 3/21 (14%)
RanBP2-type Zn finger 1241..1260 CDD:275375 2/18 (11%)
Pom121l2NP_001156400.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67
POM121 164..341 CDD:291882 37/186 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..302 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..359 10/49 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..431 6/24 (25%)
PHA03255 627..>756 CDD:165513 41/159 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..726 13/54 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 953..972
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849114
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23193
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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