DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup153 and Nup153

DIOPT Version :10

Sequence 1:NP_001097002.1 Gene:Nup153 / 32630 FlyBaseID:FBgn0061200 Length:1929 Species:Drosophila melanogaster
Sequence 2:XP_061510968.1 Gene:Nup153 / 1272252 VectorBaseID:AGAMI1_008764 Length:1408 Species:Anopheles gambiae


Alignment Length:1766 Identity:398/1766 - (22%)
Similarity:633/1766 - (35%) Gaps:568/1766 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EESEEEE--EEEDESS----------AGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSKD 81
            :.|:|::  |||||.:          |..:.|:||:.|                       :|::
Mosquito    15 QRSQEDDDCEEEDEVTPTGRSGRPVLAATMEEADSDRS-----------------------NSRN 56

  Fly    82 GNDALSSPANLRQSQPRQSNGRLTTKRKRGRRRIMLAEVDADAADDLDDGSDAKGLNYEEVALAD 146
            ..:.::|.....|.|  ...|::.:.....     |:::..:|.:.:......:.....||.|:.
Mosquito    57 HTNTINSSTTSEQDQ--SLVGKIASNFLSN-----LSKLVRNAKEKIVSPKQGRNKRSLEVDLSG 114

  Fly   147 NIAEHDLAAEDEQTRRSEYNVFLLRKRAGAVAAAGGDEDEAEEDE---------LEEDDEDGDEE 202
            ......||||..:           |.|:..|.....:|:|.|::|         :|::.|:..:|
Mosquito   115 RQVREQLAAEPRK-----------RPRSSIVDKEEEEEEEGEDEEDQDRTERAVMEQEQEEYADE 168

  Fly   203 DDDEEQENLQQSA---AVQTKRRRL-ELETPVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKG 263
            :|:|:.....::|   .:.|||||| |:|.              |..||||..:|....:..   
Mosquito   169 NDEEQVSKAHRNARTYEMVTKRRRLHEVEL--------------SVAAAPLPRSTIGMRASR--- 216

  Fly   264 VSHIAPHRRNHLNLYGSQRQREPAYNFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSYNNS 328
                ||.|       .|:..:...::.|.      ..||.:..:           :||...|.|:
Mosquito   217 ----APIR-------SSKHTQTDRFDRFV------AQTGRMERA-----------TSTVGQYRNA 253

  Fly   329 LSSLPNHKRPSLIGKQTHRRDLTMDETGTGPAMSSEEHLNHLLRISRTNNNTSNNNNNNNNNNNV 393
            .:.          |:.|.|..|    .|...:::|.:.:.....|..|                 
Mosquito   254 RND----------GRPTGRTSL----FGRPASVASSDSVFRPYSIHST----------------- 287

  Fly   394 IETKTRRSELSAAAGGCGD-----SQSESDMNEYHDNGEGHDGLRPSHYNSNSNLEFYGNLQS-- 451
            :.|.|..|......|..|:     :.|:........:|.....|..:||.....     :||.  
Mosquito   288 LPTATVTSGAEPEDGAAGEPARPFAASKFGQGLADASGRMTSFLGNAHYRQRME-----SLQRGA 347

  Fly   452 -SKSIFNRSNTAAQQSHRNSTWSLNSLTQRR-RFNASIYGSTSALSDSRLLSGSASNSGSASASS 514
             :|:.|:..:..|:..:  |:.|.:|::.|| .||.:::||.|:||..|:         ......
Mosquito   348 VAKAFFSSHDEPAKSLY--SSGSESSVSSRRPSFNRTLFGSVSSLSSGRI---------PPEYGG 401

  Fly   515 SPFYQGRTTFGGNSGNNRLFSRSNLSSSAASSMLGLNSAGSSPAHQLHASMTGGIGYGMKAVDMR 579
            ||||.|.|.:||.|....|.:...:..||                                   :
Mosquito   402 SPFYDGLTRYGGASAARTLATNVMVQRSA-----------------------------------Q 431

  Fly   580 PSDSGSL----AETSVG---QGGSKKP-GTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQS 636
            ||:|..:    |.|..|   :.|::.| ...:|:|:.|:.::|:::||    .|:.|..:.|.  
Mosquito   432 PSNSTLVVRQDAATGTGRRREAGAEPPKAPEISSTSQRMRHILDTFST----NKKNGQPVPEQ-- 490

  Fly   637 SRQQRQGTPATPYLRSTSASRNVSVPNHINELAEL-----RSNKLLVP----TMQQLLERRRLHR 692
                        :|.::|..|         ||.||     ::|::..|    ...::||..::.|
Mosquito   491 ------------FLSNSSLGR---------ELDELIDRSKQTNRIAYPYPDVHSPRILEMLQIMR 534

  Fly   693 VTQNSRDVVHSQNVRAGGENNQEKPKPTA----PY---VAPIDQSANHTQHTNKMRSRLSHQTR- 749
             .|.|..:::        |..:..|:|.|    .|   :.|.|:.|:.::..|     |:.:|| 
Mosquito   535 -EQKSASILN--------EPVEYVPRPPAVPLMEYDVPLLPADRPASPSERRN-----LASETRP 585

  Fly   750 NKETRTAEEEAPPPLDLPQISFPDMASAPKFDLIIKPTVPVVSKPSTTDPIQSSKSSNTNLSTTN 814
            :.|...|.||....|..|..:...:...|:|     ...|:.|:|.|.:..:.:.:.|....|.:
Mosquito   586 SLEASKAPEELKQQLAHPLPNPEHLRGLPRF-----RWNPLSSQPVTAEVKRKAVNGNETTPTHD 645

  Fly   815 SKQMPNFLANPQPAAPIVNFAANG---------------------NVSAISKPSK-----RTFTF 853
            .::......:.:...........|                     .|..:.:.|.     :.|||
Mosquito   646 EQEQLVGAEDKRETEQQEQHEEAGEEHGESEEEAWDDTDLMEQEYEVKELCRSSTPIEGVQQFTF 710

  Fly   854 SEPTPLSNFQE-NCIPKPKINRKYTFSAPAPLDDLRITNKQSQPTING-----TPSSKEWECDTC 912
            :.|..|....| ...|.|.|.  :||::||     |..::..:|....     ..|:.:|.||.|
Mosquito   711 ASPVALGEPMELEFNPSPTIT--FTFASPA-----RCLDQDFEPKARTFQELMAESAGKWVCDMC 768

  Fly   913 MVRNKPEINKCVACETAKPVASAAPVQAPLPPSTAAID----TQSFVGFGDRFKKSTTAWE---- 969
            |:.|:||..||:|||:||| ......|..||...|..|    |.|.:......||.....:    
Mosquito   769 MIPNEPEQQKCMACESAKP-GKKPEQQLQLPAKNATHDSEPQTPSDLKLWLAMKKPVQQQQQPCA 832

  Fly   970 CDACMLSNKAE---------ASKCIACETP---------RKTV---------APKVNNFSPLITN 1007
            |::.....|.|         |:.....:||         :|.|         |..|.:|..|:..
Mosquito   833 CESAKPGKKPEQQLQPPAKNATHDSEPQTPSDLKLWLAMKKPVQQQQQPSSSAQPVRSFQELMAE 897

  Fly  1008 AKSNEWECSVCLVRNKVEVSKCVACESAKPG-------ATMALPATSNIAVATPSII-------- 1057
            : :.:|.|.:|::||:.|..||:||||||||       ...|..||.:....|||.:        
Mosquito   898 S-AGKWVCDMCMIRNEPEQQKCMACESAKPGKKPEQQLQPPAKNATHDSEPQTPSDLKLWLAMKK 961

  Fly  1058 --------------TDGFGDRFKKSATAWECDACMLSNKAEASKCIACETPRKSSTPI--ANSSY 1106
                          ...|.:...:||..|.||.||:.|:.|..||:|||:.:.:..|:  .....
Mosquito   962 PVQQQQQPSSSAQPVRSFQELMAESAGKWVCDMCMIRNEPEQQKCMACESAKPAKKPVQQQQQQQ 1026

  Fly  1107 PSINNNLPAGSGFDISFTRKANMWECQTCLVMNKSSDEECIACQT------PNSQ-----ARNSN 1160
            |..:...|..| |.......|..|.|..|::.|:...::|:||::      |..|     |:||:
Mosquito  1027 PLTSTTQPVRS-FQELMAESAGKWVCDMCMIRNEPEQQKCMACESAKPAKKPEEQQQHPPAKNSS 1090

  Fly  1161 SESALISSISSSSASFSGSLSRPSSRSSSGSTSTCGSVCSGSIVSISSTTESAKALSA----KKV 1221
            .:|...:||                                         |..|.|:|    .||
Mosquito  1091 QDSEPHTSI-----------------------------------------EWKKMLAADSPFSKV 1114

  Fly  1222 PPKPDAGFQQLVAAQKTSTWECEACLAKNDMSRKTCICCEQMMP--EAFNPAATTANSAASSVPK 1284
            |...| |||.:|...|.|||.|:.|.|:|.:....|:||||..|  .....|...|:.||..|||
Mosquito  1115 PELKD-GFQSIVEKMKASTWVCDTCTAQNPIEHGRCLCCEQDRPGGGGAGSAPGKASEAAVPVPK 1178

  Fly  1285 FRFGFSHVKEVVKPSVETTTTPAPTSAQFSFGFGQSNQGKDVADSKKTEAPKT---FMFGVSKVE 1346
            |.||.        ||....|....|:.        ..|.|:|..:..|..|..   |:||..   
Mosquito  1179 FTFGM--------PSFTPNTAANSTTI--------DTQSKEVKAAGITSTPSRTGGFLFGAF--- 1224

  Fly  1347 EPKTVSFGTGIKETTATSSTEATAPTPAAAAPAPVQFVFKAPTTATTASSLTTTISTTSNAPALG 1411
                    .|:...|:.|...|.||.| |.||.|.                             |
Mosquito  1225 --------NGVDRGTSNSVAPAPAPAP-ATAPVPA-----------------------------G 1251

  Fly  1412 GFSFGAPSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSAVSSTSSSQQPVAKAPTLGFGVSSSTV 1476
            .||||||::|        |....|||           :.|...|||:      |:..|   ::|.
Mosquito  1252 LFSFGAPANS--------SHPCPPAA-----------AVVPEASSSK------PSFSF---TNTS 1288

  Fly  1477 TTTTTSTKVFAFTPASGLDPAAATSAPAAGAGFSFGSQSKPAT-TQNTGTFFFGQPTAVAPATPT 1540
            ||.|::.:.|.| .||...|:|.:..|.|.:|.|...|.:.|| |..||              .:
Mosquito  1289 TTVTSAAQPFVF-GASPKVPSAVSFQPLANSGSSMAQQQQFATATSVTG--------------DS 1338

  Fly  1541 NPSVSSIFGAPATSTTASTSVSATTSTSTANAIASSFAPTSTPQLFGNWGEKKTDLTTFGASSGS 1605
            |.:.:|:||.|     :||.|:...:|::                  ||.| ...:..||..|..
Mosquito  1339 NAAPTSLFGLP-----SSTPVNFNFTTTS------------------NWAE-SNPVFQFGGKSQP 1379

  Fly  1606 GTTTTPSFGWS 1616
            ..:...|.|.|
Mosquito  1380 NPSAQISAGQS 1390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup153NP_001097002.1 RanBP2-type Zn finger 864..883 CDD:275375 7/19 (37%)
zf-RanBP 903..931 CDD:395516 15/27 (56%)
RanBP2-type Zn finger 907..926 CDD:275375 10/18 (56%)
zf-RanBP 968..992 CDD:395516 6/45 (13%)
RanBP2-type Zn finger 968..987 CDD:275375 4/31 (13%)
zf-RanBP 1009..1038 CDD:395516 14/28 (50%)
RanBP2-type Zn finger 1013..1032 CDD:275375 8/18 (44%)
zf-RanBP 1072..1097 CDD:395516 12/24 (50%)
RanBP2-type Zn finger 1072..1091 CDD:275375 9/18 (50%)
zf-RanBP 1126..1155 CDD:395516 9/34 (26%)
RanBP2-type Zn finger 1130..1149 CDD:275375 5/18 (28%)
ZnF_RBZ 1239..1261 CDD:197784 9/21 (43%)
RanBP2-type Zn finger 1241..1260 CDD:275375 6/18 (33%)
Nup153XP_061510968.1 None

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