DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup153 and POM121C

DIOPT Version :9

Sequence 1:NP_001097002.1 Gene:Nup153 / 32630 FlyBaseID:FBgn0061200 Length:1929 Species:Drosophila melanogaster
Sequence 2:NP_001092885.2 Gene:POM121C / 100101267 HGNCID:34005 Length:987 Species:Homo sapiens


Alignment Length:1243 Identity:304/1243 - (24%)
Similarity:430/1243 - (34%) Gaps:384/1243 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   760 APPPLDLPQISFPDMASAPKFDLIIKPTVPVVSKPSTTDPIQSSKSSNTNLSTTNSKQMPN---- 820
            |||.....:.:.|:.        ||..|   :|.||:..|...:|  .|.||....|:...    
Human    11 APPDRRFSRSAIPEQ--------IISST---LSSPSSNAPDPCAK--ETVLSALKEKKKKRTVEE 62

  Fly   821 ----FLANPQPAAPIVNFAANGNVSAISKPSKRTFTFSEPTPLSNFQENCIPKPKINRKYTFSAP 881
                ||...:......:.:.:|: ||.           ||...|....:.:|||. :.|...::.
Human    63 EDQIFLDGQENKRRRHDSSGSGH-SAF-----------EPLVASGVPASFVPKPG-SLKRGLNSQ 114

  Fly   882 APLDDLRITNKQSQPT---------INGTPSSKE----------------WECDTCMVRNKPEIN 921
            :..|.|   ||:|:.:         .:|.|||..                |:      ||.|   
Human   115 SSDDHL---NKRSRSSSMSSLTGAYTSGIPSSSRNAITSSYSSTRGISQLWK------RNGP--- 167

  Fly   922 KCVACETAKPVASAAPVQAPLPPSTAAIDTQSFVGFGDRFKKSTTAWECDACMLSNKAEASKCIA 986
                  ::.|.:|.|..::..|...|              ||......|.....|....|.|...
Human   168 ------SSSPFSSPASSRSQTPERPA--------------KKIREEELCHHSSSSTPLAADKESQ 212

  Fly   987 CETPRKTVAPKVNNFSPLITNAKSNEWECSVCLVRNKVEVSKCVACESAKPGATMALPATSNIAV 1051
            .|....|...|..|.:...|...|.:.:..|.|:             .::.|..:.||....:..
Human   213 GEKAADTTPRKKQNSNSQSTPGSSGQRKRKVQLL-------------PSRRGEQLTLPPPPQLGY 264

  Fly  1052 ATPSIITDGFGDRFKKSATAWECDACMLSNKAEASKCIACETPRKSSTPIANSSYPSINNNLPAG 1116
            :    ||....|..||::..|...|  |.:|::|:.....|||        .::.||....|||.
Human   265 S----ITAEDLDLEKKASLQWFNQA--LEDKSDAASNSVTETP--------PTTQPSFTFTLPAA 315

  Fly  1117 SGFDISFTRKANMWECQTCLVMNKSSDEECIACQTPNSQARNSNSESALISSISSSSASFSGSLS 1181
            :                              ....|.|..  :.|.:.|:.|:.....    ..|
Human   316 A------------------------------TASPPTSLL--APSTNPLLESLKKMQT----PPS 344

  Fly  1182 RPSSRSSSGSTSTCGSVCSGSIVSISSTTESAKALSAKKVPP-KPDAGFQQLVAAQKTSTWECEA 1245
            .|....|:|:.:|                   :|||..|.|. .|..|..|              
Human   345 LPPCPESAGAATT-------------------EALSPPKTPSLLPPLGLSQ-------------- 376

  Fly  1246 CLAKNDMSRKTCICCEQMMPEAFNPAATTANSAASSVPKFRFGFSHVKEVVKPS-VETTTTPAPT 1309
                                 :..|....:.|..|..|....|.     :..|| |..|.|.||.
Human   377 ---------------------SGPPGLLPSPSFDSKPPTTLLGL-----IPAPSMVPATDTKAPP 415

  Fly  1310 SAQFSFGFGQSNQGKDVADSKKTEAPK-TFMFGVSKVEEPKTVSFGTGIKETTATSSTEATAPTP 1373
            :.|      .....|..|.|..:.||| :|:||                     |.:|..::|..
Human   416 TLQ------AETATKPQATSAPSPAPKQSFLFG---------------------TQNTSPSSPAA 453

  Fly  1374 AAAAPAPVQF--VFKAP----------------TTATTASSLTTTISTTSNA--PALGGFSFGAP 1418
            .||:.|...|  :|.||                .||.::|||.||.|||:..  |...  |.|.|
Human   454 PAASSASPMFKPIFTAPPKSEKEGLTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFS--SMGPP 516

  Fly  1419 SS---SSTVSSSTTSTSANPAAVKPMFSWSGAGSAVS-----STSSSQQPVAKAPTLGFGVS--S 1473
            :|   .:.....||:.:..|....|:|  :|..||.|     :::|.....|..|..|||::  |
Human   517 ASVPLPAPFFKQTTTPATAPTTTAPLF--TGLASATSAVAPITSASPSTDSASKPAFGFGINSVS 579

  Fly  1474 STVTTTTTSTKVFAFTP-ASGLDPAAATS-APAAGAGFSFGSQSKPATTQNTGTFFFGQPTAVAP 1536
            |:..:|||||...|..| ..|...|:|.| .||.|:.|.||......||....||....||||..
Human   580 SSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPALPTTTTVTTFSQSLPTAVPT 644

  Fly  1537 ATPTNPSVSSIFGAPATSTTASTSVSATTSTSTANAIASSFAPTSTPQLFGNWGEKKTDLTTFGA 1601
            ||.::.:..|.||     :|.:||..||:|..|.     :|:.||||          |....||:
Human   645 ATSSSAADFSGFG-----STLATSAPATSSQPTL-----TFSNTSTP----------TFNIPFGS 689

  Fly  1602 SSGS------GTTTTPSFGWSSNGDAAKSNSAAVGSAAVPSSSASTMATPIFGSSSMFGPSSSSN 1660
            |:.|      |....|:||            ||.|.   |..:|....||.||||..||      
Human   690 SAKSPLPSYPGANPQPAFG------------AAEGQ---PPGAAKPALTPSFGSSFTFG------ 733

  Fly  1661 NTTSTSTTSLPFGSAATTAATTPAGGNAALTGLFGNVGNSLAGVGAPVATTPAATAAAPLTNIFG 1725
            |:.:.:..:.|..:.|:|....||.....:...||...:|..|:        .|||:|     ||
Human   734 NSAAPAPATAPTPAPASTIKIVPAHVPTPIQPTFGGATHSAFGL--------KATASA-----FG 785

  Fly  1726 NPTPVAAAAPVFGSGSTIPSAGFGAPAAAAPLAAPALPGAFNFGGATAATPAASSAPFVFGSSTN 1790
            .|   |::.|.||..:.:.|  |||          |....|   |||..|.::.|:..||||:|.
Human   786 AP---ASSQPAFGGSTAVFS--FGA----------ATSSGF---GATTQTASSGSSSSVFGSTTP 832

  Fly  1791 EPLAKPSFNFTGSAASSTAPAPAFNFTANTAATNNPSGGDSHPRIFQFGSSQ---PAANNQF-GG 1851
            .|     |.|.|||    |||.:.:|..|.|.    .|..:....|.||:.|   .|.:..| ||
Human   833 SP-----FTFGGSA----APAGSGSFGINVAT----PGSSATTGAFSFGAGQSGSTATSTPFTGG 884

  Fly  1852 AGGATNNSAGGMPMFNFSPGAPQMQSTPNANALFQFSATSTAPANIFAFNPPAAGNSAQSSQTAR 1916
            .|.....:.|....|.|:.|     ||..:..:|..:||.|     |..|.||.|.....|..:.
Human   885 LGQNALGTTGQSTPFAFNVG-----STTESKPVFGGTATPT-----FGQNTPAPGVGTSGSSLSF 939

  Fly  1917 RKIRAPVR 1924
            ....||.:
Human   940 GASSAPAQ 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup153NP_001097002.1 Nup153 <458..910 CDD:285770 38/182 (21%)
RanBP2-type Zn finger 864..883 CDD:275375 4/18 (22%)
zf-RanBP 903..931 CDD:279035 6/43 (14%)
RanBP2-type Zn finger 907..926 CDD:275375 4/18 (22%)
zf-RanBP 968..992 CDD:279035 5/23 (22%)
RanBP2-type Zn finger 968..987 CDD:275375 4/18 (22%)
zf-RanBP 1009..1038 CDD:279035 3/28 (11%)
RanBP2-type Zn finger 1013..1032 CDD:275375 2/18 (11%)
zf-RanBP 1072..1097 CDD:279035 8/24 (33%)
RanBP2-type Zn finger 1072..1091 CDD:275375 5/18 (28%)
zf-RanBP 1126..1155 CDD:279035 1/28 (4%)
RanBP2-type Zn finger 1130..1149 CDD:275375 0/18 (0%)
ZnF_RBZ 1239..1261 CDD:197784 0/21 (0%)
RanBP2-type Zn finger 1241..1260 CDD:275375 0/18 (0%)
POM121CNP_001092885.2 POM121 52..287 CDD:291882 55/298 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158716
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23193
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.030

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