DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9784 and Synj2

DIOPT Version :9

Sequence 1:NP_001259623.1 Gene:CG9784 / 32629 FlyBaseID:FBgn0030761 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_001106824.1 Gene:Synj2 / 20975 MGIID:1201671 Length:1479 Species:Mus musculus


Alignment Length:615 Identity:156/615 - (25%)
Similarity:259/615 - (42%) Gaps:134/615 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQTEASKTPKIPDSEPDGSKGKGKQQLE-----TYRVYVVTWNV--GSRFPDNISLRHLLGLQD 58
            :..|....||:|       .|...::|.|     ..::.|.||||  |.:|..|     |||..:
Mouse   502 LDNTALLATPRI-------LKAMTERQSEFTNFKRIQIAVGTWNVNGGKQFRSN-----LLGTAE 554

  Fly    59 VT------------VDKDTKETNAHLPDIYALGLQE---------VNAQPQQQVLGLFKEDPWTH 102
            :|            ||.....:.|   |::|:|.:|         |||....:.:       |..
Mouse   555 LTDWLLDAPQLSGAVDSQDDGSPA---DVFAIGFEEMVELSAGNIVNASTTNRKM-------WGE 609

  Fly   103 K-AKELLRNYDYVAVKTEQMQGLLLSMFVRRQHVEHLQDIEAEFTRTGFGGIWGNKGAVSVRFTL 166
            : .|.:.|::.|:.:.:.|:.|:.|.:|||..||..::|:..:..:||.||..||||||.:||.|
Mouse   610 QLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVKTGMGGKAGNKGAVGIRFQL 674

  Fly   167 YGCGLAFVVAHLTAHDHMMDERIEDYKQILENHHYHVKRYREIYDHDYVFWFGDLNFRLQGSDSS 231
            :.....||.:||||....:.||.|||::|  .|.......|.|:.||||||.||.|:|:  ..:.
Mouse   675 HSTSFCFVCSHLTAGQSQVKERNEDYREI--THKLSFPSGRNIFSHDYVFWCGDFNYRI--DLTY 735

  Fly   232 TEVRELVRDESQHEALIQRDQLYQVREKSQLAFQVLQERLPAFPPTFKFREGTSEYDLK---RRP 293
            .||...|: ....:.|::.||| |:::.|...|:...|....|.||:|:..|::.||..   |.|
Mouse   736 EEVFYFVK-RQDWKKLMEFDQL-QLQKSSGKIFKDFHEGAVNFGPTYKYDVGSAAYDTSDKCRTP 798

  Fly   294 AWTDRIMY--AVQPLNRQPGMQLSIEQCSYKSHPL-----------------YTISDHKPVTSDF 339
            |||||:::  ...|.::..| :|::........|.                 ...|||:||.:..
Mouse   799 AWTDRVLWWRKKHPYDKTAG-ELNLLDSDLDGDPQIRHTWSPGTLKYYGRAELQASDHRPVLAIV 862

  Fly   340 TIKLYP-NVRAPGVVFSPLSLWKIGDENTVEYHKQAEFDEGSNDWIGIFPSE-----YASLADY- 397
            .:::.. :|.|...||..:|..:...:.||..:.|:...|..|:    ||.:     ..:|.:| 
Mouse   863 EVEVQEVDVGARERVFQEVSSVQGPLDATVVVNLQSPTLEEKNE----FPEDLRTELMQTLGNYG 923

  Fly   398 -VAYEYVNQAES-PSSSDSNHQPDPFETPSHHRRGRHHHRNRQRQRRHQEANAQELVR------- 453
             :....:||.:. .:.:||:......:......:|| ..:.|.:.:...|...:||:|       
Mouse   924 TIILVRINQGQMLVTFADSHSALSVLDVDGMKVKGR-AVKIRPKTKDWLEGLREELLRKRDSMAP 987

  Fly   454 -------------LDFAD-DVE-----LRHGEQYLLIYF-------------RSTGVRGVTSLAG 486
                         .||:. |.|     |...|.||:..|             .|:......:.|.
Mouse   988 VSPTANSCLLEENFDFSSLDYESEGDVLEEDEDYLVDGFGQPVVSDSELGGDNSSDTMSSLTPAS 1052

  Fly   487 VSGVFVAEKRHGSPHRTEYHVDXLAEALDI 516
            .|.....:|:|.: ::.:.|:. |.:.|::
Mouse  1053 KSPALAKKKQHPT-YKDDAHLVTLKQELEV 1081

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9784NP_001259623.1 INPP5c_INPP5J-like 31..341 CDD:197328 107/355 (30%)
Synj2NP_001106824.1 Syja_N 61..342 CDD:280532
EEP 530..861 CDD:294334 107/352 (30%)
DUF1866 872..1008 CDD:286093 26/140 (19%)
CEND1 1290..>1405 CDD:292305
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836209
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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