DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9784 and synj1

DIOPT Version :10

Sequence 1:NP_001259623.1 Gene:CG9784 / 32629 FlyBaseID:FBgn0030761 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_004912203.1 Gene:synj1 / 100487517 XenbaseID:XB-GENE-956330 Length:1548 Species:Xenopus tropicalis


Alignment Length:363 Identity:110/363 - (30%)
Similarity:174/363 - (47%) Gaps:75/363 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RVYVVTWNV--GSRFPD----NISLR-------HLLGLQDVTVDKDTKETNAHLPDIYALGLQE- 82
            |:.|.||||  |.:|..    |.:|.       .:.|:|:.. |:.:|..     ||:|:|.:| 
 Frog   538 RICVGTWNVNGGKQFRSIAYKNSTLTDWLLDAPRIAGIQEFQ-DRRSKPV-----DIFAIGFEEM 596

  Fly    83 --------VNAQPQQQVLGLFKEDPW-THKAKELLRNYDYVAVKTEQMQGLLLSMFVRRQHVEHL 138
                    |||....|.|       | |...|.:.|::.||.:.:||:.|:.|.:|:|.||...:
 Frog   597 VELNAGNIVNASTANQKL-------WATELQKTVSRDHKYVLLASEQLVGVCLYIFIRPQHAPFI 654

  Fly   139 QDIEAEFTRTGFGGIWGNKGAVSVRFTLYGCGLAFVVAHLTAHDHMMDERIEDYKQILENHHYHV 203
            :|:..:..:||.||..||||||::|...:...|.||.:|..|....:.||.|||.:|.....:.:
 Frog   655 RDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDYNEIARKLSFPM 719

  Fly   204 KRYREIYDHDYVFWFGDLNFRLQGSDSSTEVRELVRDESQHEALIQRDQLYQVREKSQLAFQVLQ 268
            .|.  ::.||||||.||.|:|:...:.  ||:|::|::: .::||..|||...:...|: |:..|
 Frog   720 GRM--LFSHDYVFWCGDFNYRIDLPNE--EVKEMIRNQN-WDSLILGDQLINQKNSGQV-FRGFQ 778

  Fly   269 ERLPAFPPTFKFREGTSEYDLK---RRPAWTDRIMY-------------------AVQ-----PL 306
            |....|.||:|:...:.:||..   |.||||||:::                   ::|     |.
 Frog   779 EGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNSSLQEGKNIPY 843

  Fly   307 NRQPGMQLSIEQCSYKSHPLYTISDHKPVTSDFTIKLY 344
            ...||..|...:...|:      |||:|:.|...|.::
 Frog   844 TWNPGTLLHYGRVELKT------SDHRPIVSLIDIDIF 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9784NP_001259623.1 INPP5c_INPP5J-like 31..341 CDD:197328 109/358 (30%)
SKICH 352..>415 CDD:465482
synj1XP_004912203.1 COG5329 9..484 CDD:227637
EEP 537..872 CDD:469791 109/358 (30%)
RRM_SF 871..987 CDD:473069 1/5 (20%)
PHA03247 <1061..1264 CDD:223021
Atrophin-1 1164..>1426 CDD:460830
Blue background indicates that the domain is not in the aligned region.

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