DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG17949 and his-66

DIOPT Version :10

Sequence 1:NP_724342.1 Gene:His2B:CG17949 / 326273 FlyBaseID:FBgn0061209 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_502149.1 Gene:his-66 / 186670 WormBaseID:WBGene00001940 Length:123 Species:Caenorhabditis elegans


Alignment Length:237 Identity:52/237 - (21%)
Similarity:76/237 - (32%) Gaps:89/237 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 HPQ---------RDVNNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNC 211
            ||:         :|::.|...|:|.....|                  .:|| |:|.|||...  
 Worm    72 HPRLWLRVDRFVKDLSQPGVFLNIESAVSA------------------ARPG-DTILIVAGGN-- 115

  Fly   212 SGIAARACGLVSLEPMKVAEILKDRPSWFRDCRCV--------ETLNVIPTGNGGTIELVNTQIY 268
                           .:|:.|...:|      .|:        ||..|...|:...:||::|...
 Worm   116 ---------------YRVSNIQIKKP------LCLVGGGEIPDETTLVCARGSDSALELLSTCKL 159

  Fly   269 APTTLAAARDFWTLRYSTSLE-DGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFLIRPCDG 332
            |..|:.|......|..|..|. ||..:.||.:       |...||...|...            |
 Worm   160 ANLTVKAELGCCLLHRSGRLTIDGCVLQCETN-------PLDHLSCPIVSTA------------G 205

  Fly   333 GGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALR 374
            ...|.:|:.||:     |.|.:     :.||.|..:||...|
 Worm   206 DEDIENILSHVE-----VKETV-----TGKIKANSVTVLQTR 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG17949NP_724342.1 HFD_H2B 33..120 CDD:467035
his-66NP_502149.1 HFD_H2B 27..120 CDD:467035 15/83 (18%)
Blue background indicates that the domain is not in the aligned region.

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