| Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_116687.1 | Gene: | SMC2 / 850589 | SGDID: | S000001927 | Length: | 1170 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 1276 | Identity: | 330/1276 - (25%) |
|---|---|---|---|
| Similarity: | 585/1276 - (45%) | Gaps: | 208/1276 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLS-DEFTHLRPEQRQSL 64
Fly 65 LHEGTGARVISAYVEIIFDNSD-NRVPI---DKEEIFL-RRVIGAKKDQYFLNKKVVPRNEVVNL 124
Fly 125 LESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLNLLRETDSKVEKI 189
Fly 190 SEYL-KTIEDRLQTLEEEKEELKEYQK----WDKTRR-TLEYIRYETELKDTKKALDELQLQRKS 248
Fly 249 SSDKKKIYNIEIQKAQEKIKDVQKNLKEAKKKVQSTKEER-----SVLMTEQQQLLRE----KTK 304
Fly 305 LDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKEEDCSRELQLKE 369
Fly 370 QKRKELYAKQGRGSQFSSRED--------RDKWITNELKSISKQTRDKIAHHAK---LVEDLKKD 423
Fly 424 ATSEKDLGQK-IEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTHK 487
Fly 488 --EELSRADQALRSMAGKPILNGCDSVRKVLDSFVERGGQSAEIARAYYGPVIENFSCDK---TI 547
Fly 548 YTAVEVTAANRLFHHIVESEYEGTQILKEMNKLKLPGEVTFMPLNRLQVKIHDYPDDPDSIPMIS 612
Fly 613 K------------LKYDEQHDKALRYIFGKTLICRNLERATEL-------AKSTGLDCVTLDGDQ 658
Fly 659 VSSKGSLTGGYFNTSRSRLEMQKKRTEYTSQIAEFEKKLSKLRNELK---STENNINSIVSEMQK 720
Fly 721 TETKQGKSK-DVFEKVQGEIRLMKEELVR----IEQYRAPKERSLAQCKASLESM-------TST 773
Fly 774 KSSLEAELKQEL------MSTLSSQDQREIDQLNDDIRRLNQENKEAFTQRMQFEVRKNKLDNLL 832
Fly 833 INNLFRRRDELIQALQEISVE--DRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQLQK 895
Fly 896 ELQQELETHVRK----EKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASLGAVPLVDPSY 956
Fly 957 TRMSLKNIFKE---------LEKANQHLKKYNHVNKKALDQFLSFSEQKEK----LYRRKEELDI 1008
Fly 1009 GDQKIHMLIQSLEMQKVEAIQFTFRQVAQNFTKVFKKLVPMGAGFLILKTKDNEGDEMEKEVENS 1073
Fly 1074 DAFTGIGIRVSFTGVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAMHRK 1138
Fly 1139 AVANMIHELSDTAQFITTTFRPELLENAHKFYGVRFRNKVS 1179 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 329/1275 (26%) |
| ABC_SMC3_euk | 3..>159 | CDD:213239 | 55/161 (34%) | ||
| SMC_hinge | 533..643 | CDD:214944 | 35/124 (28%) | ||
| TMPIT | 678..>760 | CDD:285135 | 17/89 (19%) | ||
| CHD5 | <780..>822 | CDD:282299 | 11/47 (23%) | ||
| P-loop_NTPase | <1088..1182 | CDD:304359 | 32/92 (35%) | ||
| SMC2 | NP_116687.1 | Smc | 1..1169 | CDD:224117 | 330/1276 (26%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||