Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001077968.1 | Gene: | TTN7 / 817259 | AraportID: | AT2G27170 | Length: | 1204 | Species: | Arabidopsis thaliana |
Alignment Length: | 1224 | Identity: | 485/1224 - (39%) |
---|---|---|---|
Similarity: | 775/1224 - (63%) | Gaps: | 47/1224 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQRQSLL 65
Fly 66 HEGTGARVISAYVEIIFDNSDNRVPIDKEEIFLRRVIGAKKDQYFLNKKVVPRNEVVNLLESAGF 130
Fly 131 SSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLNLLRETDSKVEKISEYLKT 195
Fly 196 IEDRLQTLEEEKEELKEYQKWDKTRRTLEYIRYETELKDTKKALDELQLQR-KSSSDKKKIYNIE 259
Fly 260 IQKAQEKIKDVQKNLKEAKKKVQSTKEERSVLMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKE 324
Fly 325 RADQELKNLKVTIAEREKELDDVKPKYEAMKRKEEDCSRELQLKEQKRKELYAKQGRGSQFSSRE 389
Fly 390 DRDKWITNELKSISKQTRDKIAHHAKLVEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKK 454
Fly 455 YYELKKTKDQHQSMRNELWRKETQMTQQLQTHKEELSRADQALRSMAGKPILNGCDSVRKVLDSF 519
Fly 520 VERGGQSAEIARAYYGPVIENFSCDKTIYTAVEVTAANRLFHHIVESEYEGTQILKEMNKLKLPG 584
Fly 585 EVTFMPLNRLQVKIHDYPDDPDSIPMISKLKYDEQHDKALRYIFGKTLICRNLERATELAKSTGL 649
Fly 650 DCVTLDGDQVSSKGSLTGGYFNTSRSRLEMQKKRTEYTSQIAEFEKKLSKLRNELKSTENNINSI 714
Fly 715 VSEMQKTETKQGKSKDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEA 779
Fly 780 ELKQELMSTLSSQDQREIDQLNDDIRRLNQENKEAF-TQRMQFEVRKNKLDNLLINNLFRRRDEL 843
Fly 844 IQALQEI-------SVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQLQKELQQEL 901
Fly 902 ETHVRKEKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASLGAVPLVD---PSYTRMSLKN 963
Fly 964 IFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYRRKEELDIGDQKIHMLIQSLEMQKVEAI 1028
Fly 1029 QFTFRQVAQNFTKVFKKLVPMGAG-FLILKTKDNEGDEMEKEVENS----------DAFTGIGIR 1082
Fly 1083 VSFTGVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAMHRKAVANMIHEL 1147
Fly 1148 SDT--AQFITTTFRPELLENAHKFYGVRFRNKVSHIDCVTREEAKDFVEDDSTH 1199 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 477/1202 (40%) |
ABC_SMC3_euk | 3..>159 | CDD:213239 | 97/155 (63%) | ||
SMC_hinge | 533..643 | CDD:214944 | 50/109 (46%) | ||
TMPIT | 678..>760 | CDD:285135 | 20/81 (25%) | ||
CHD5 | <780..>822 | CDD:282299 | 12/42 (29%) | ||
P-loop_NTPase | <1088..1182 | CDD:304359 | 60/95 (63%) | ||
TTN7 | NP_001077968.1 | Smc | 1..1196 | CDD:224117 | 481/1216 (40%) |
ABC_SMC3_euk | 3..>166 | CDD:213239 | 101/162 (62%) | ||
CDC37_N | <185..288 | CDD:296150 | 39/103 (38%) | ||
SMC_hinge | 522..633 | CDD:214944 | 51/120 (43%) | ||
P-loop_NTPase | <1070..1185 | CDD:304359 | 66/115 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 834 | 1.000 | Domainoid score | I5 |
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3974 | |
Inparanoid | 1 | 1.050 | 882 | 1.000 | Inparanoid score | I58 |
OMA | 1 | 1.010 | - | - | QHG54174 | |
OrthoDB | 1 | 1.010 | - | - | D119789at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003940 | |
OrthoInspector | 1 | 1.000 | - | - | oto4126 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101525 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR43977 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3237 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.840 |