Protein Alignment SMC3 and ccdc157

DIOPT Version :10

• Sequence 1: NP_523374.2
• Gene: SMC3 / 32627
• FlyBaseID: FBgn0015615
• Length: 1200
• Species: Drosophila melanogaster
• Sequence 2: XP_002663220.3
• Gene: ccdc157 / 368731
• ZFINID: ZDB-GENE-030616-155
• Length: 668
• Species: Danio rerio
• Alignment Length: 425
• Identity: 84/425 - (19%)
• Similarity: 169/425 - (39%)
• Gaps: 57/425 - (13%)

  Fly   630 KTLICRNLERATELAKSTGLDCVTLDG-----DQVSSKGSLTGGYFNTSRSRLEMQKKRTEYTSQ 689
            :.::..|.:....|.:|.||.| ::.|     ::....|.|:.  .:.|:...|.::..:.....
Zfish   216 QAVLKENSDAVVSLCQSLGLPC-SMQGFLEAVEETQQLGRLSA--CDISQWASEQRRDMSRVGKH 277

  Fly   690 IAEFEKKLSKLRNELKSTENNINSIVSEMQKT----ETKQGKSKDVFEKVQGEIRLMKEELVRIE 750
            :.|..:.:..|:.::|.||.....:..::.:|    :.::.|..:.:|:...|:::..|:.||
Zfish   278 VLEVRETVEPLKRKVKETEMEREKLRKQLSETVNREKEERRKMDEQWERKMQEVKVKSEDAVR-- 340

  Fly   751 QYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTLSSQDQREIDQLNDDIRRLNQEN---K 812
              |..:|:.  :.|..|..:....|.|..|||.:..:..|.:.:|  :.|.:::.||:...   |
Zfish   341 --RLKQEQE--ELKRGLTLLEDRNSELTVELKLQTEAKHSLEFER--NGLQEEVHRLHSFETMLK 399

  Fly   813 EAFTQRMQFEVRKNKLDNLL-----INNLFRRRDELIQALQEI----------SVEDRKRKLNNC 862
            |....|...|........||     .|:..:.:.|.:|..|..          ..|:....|..|
Zfish   400 EVEESRQNLEKELRSTQTLLDKERGRNHSVQHQHEALQVKQTALRKHLDVLVQQTEELHSSLEEC 464

  Fly   863 KTELVSAEKRIKKVNSDLEEIEKRVMEAVQLQKELQQELETHVRKEKEAEENLNKDSKQLEKWST 927
            :.|......::|::..:.:.:::::.........|..|:|:...:..|.||.:          |.
Zfish   465 EDEKADLGNKLKQIMREKDTLQEQLTHQQSQNSSLCTEIESQQTQITELEERV----------SR 519

  Fly   928 KENMLNEKIDECTEKIASLGAVPLVDPSYTRMSLKNIFKELEKANQHLKKYNHVNKKALD-QFLS 991
            .|.||.|.:..  |::  |.|.|.:.|.....:..::..::|    |..|.|.|..:.|. :..|
Zfish   520 LEGMLEEAVQR--ERL--LVAFPELSPQAAPQTTGDVVCDME----HQLKANLVRIRVLQKENSS 576

  Fly   992 FSEQKEKLYRRKEELDIGDQKIHMLIQSLEMQKVE 1026
            .|....:|..|:|.....|..|..:...:|.|.:|
Zfish   577 LSNSLVRLKEREENQKASDSGISEMDLRMEAQVME 611

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMC3	NP_523374.2	SMC_N	2..1180	CDD:426784	84/425 (20%)
ccdc157	XP_002663220.3	SMC_prok_B	<280..>527	CDD:274008	51/264 (19%)