| Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_610995.1 | Gene: | SMC2 / 36653 | FlyBaseID: | FBgn0027783 | Length: | 1179 | Species: | Drosophila melanogaster |
| Alignment Length: | 1294 | Identity: | 299/1294 - (23%) |
|---|---|---|---|
| Similarity: | 584/1294 - (45%) | Gaps: | 226/1294 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLS-DEFTHLRPEQRQSL 64
Fly 65 LHEGTGARVISAYVEIIFDNSDNRVPID--------KEEIFLRRVIGAKKDQYFLNKKVVPRNEV 121
Fly 122 VNLLESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLNLLRETDSKV 186
Fly 187 EKISEYLKTIEDRLQTLEEEKEELKEYQKWDKTRRTLEY-IRYETELKDTKKALDELQLQRKSSS 250
Fly 251 DKKKIYNIEIQKAQE--KIKDVQKNLKEAKKKVQSTKEERSVLMTEQQQLLREKTKLDLTIVDLN 313
Fly 314 DEVQG----DNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKE-------EDCSRELQL 367
Fly 368 KEQ-------------KRKELYAKQGRGSQFSSREDRDKWITNEL-----KSISKQ--------- 405
Fly 406 ---TRDKIAHHAKLVEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQS 467
Fly 468 MRNELWRKETQMTQQLQTHKEELSRADQALRSMAGKPILNGCDSVRKVLDSFVERGGQSAEIARA 532
Fly 533 YYGPVIENFSCDKTIYTAVEVTAANRLFHHIVESEYEGTQILKEMNKLKLPGEVTFMPLNRLQV- 596
Fly 597 ----KIHDYPDDPDSIPMI----SKLKYDEQHDKALRYIFGKTLICRNLERATELAKSTGLDC-- 651
Fly 652 VTLDGDQVSSKGSLTGGYFNTSRSRLE-------MQKKRTEYTSQIAEFEKKLSKLRNE---LKS 706
Fly 707 TENNINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESM- 770
Fly 771 TSTKSSLEAELKQELMSTLSSQDQREIDQLNDDIR---------RLNQENKEAFTQRMQFEVRKN 826
Fly 827 KLDNLLINNLFRRRDELIQALQEISVEDRKRKLNNCK-----TELVSAEKRIK-KVNSDLEEIEK 885
Fly 886 RVMEAVQLQKELQQELETHVRKEKEAEENLNKDSKQLEK----------WSTKE----NMLNEKI 936
Fly 937 DECTEKIASLGAVPLVDPSYTRMSLKNIFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYR 1001
Fly 1002 RKEELDIGDQKIHMLIQSLEMQKVEAIQFTFRQVAQNFTKVFKKLVPMGAGFLILKTKDNEGDEM 1066
Fly 1067 EKEVENSDAFTGIGIRVSFTGVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQA 1131
Fly 1132 LDAMHRKAVANMIHELSDTAQFITTTFRPELLENAHKFYGVRFRNKVSHIDCVTREEAK 1190 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 295/1281 (23%) |
| ABC_SMC3_euk | 3..>159 | CDD:213239 | 50/164 (30%) | ||
| SMC_hinge | 533..643 | CDD:214944 | 25/118 (21%) | ||
| TMPIT | 678..>760 | CDD:285135 | 20/91 (22%) | ||
| CHD5 | <780..>822 | CDD:282299 | 9/50 (18%) | ||
| P-loop_NTPase | <1088..1182 | CDD:304359 | 33/93 (35%) | ||
| SMC2 | NP_610995.1 | Smc | 1..1168 | CDD:224117 | 297/1288 (23%) |
| ABC_SMC2_euk | 1..>170 | CDD:213240 | 52/171 (30%) | ||
| SMC_hinge | 520..637 | CDD:214944 | 30/154 (19%) | ||
| V_Alix_like | 690..933 | CDD:187408 | 57/261 (22%) | ||
| P-loop_NTPase | <1073..1167 | CDD:304359 | 34/98 (35%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45464472 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 90 | 1.000 | Inparanoid score | I342 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D11228at50557 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 5 | 4.800 | |||||