| Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_723996.1 | Gene: | glu / 35001 | FlyBaseID: | FBgn0015391 | Length: | 1409 | Species: | Drosophila melanogaster |
| Alignment Length: | 1303 | Identity: | 302/1303 - (23%) |
|---|---|---|---|
| Similarity: | 578/1303 - (44%) | Gaps: | 227/1303 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 IKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQRQSLLHE 67
Fly 68 GTG-----ARVISAYVEIIFDNSDNR---VPIDKEEIFLRRVIGAKKDQYFLNKKVVPRNEVVNL 124
Fly 125 LESAGFSSSNPYYIVKQGKINQMA-------TAADSYRLKLLREVAGTRVYDERKEESLNLLRET 182
Fly 183 DSKVEKISEYLKTIEDRLQTLEEEKEELKEYQKWDKTRRTLEYIRYETELKDTKKALDELQLQRK 247
Fly 248 SSSDKKKI--YNIEIQKAQEKIKDVQKN---LKEAKKK----VQSTKEERSVLMTEQQQLLREKT 303
Fly 304 KLDLTIVDLNDEVQG--DNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKEEDCSRELQ 366
Fly 367 LKEQKR----KELYAKQGRGSQFSS--REDRDKWITNELKSISKQ---TRDKIAHHAKLVEDLKK 422
Fly 423 DATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELK------KTKDQHQSMR-NELWRKETQMT 480
Fly 481 QQ---LQTHKEELSRADQALRS------------MAGKPILNGCDSVRKVLDSFVERGGQSAEIA 530
Fly 531 RAYYGPVIENFSCDKTIYTAVEVTAANRLFHHIVESEYEGTQ----ILKEMNKLKLPGEVTFMPL 591
Fly 592 NRLQ---VKIHDYPDDPDSIPMISKL--KYDEQHDKALRYIFGKTLICRNLERATELAKSTGLD- 650
Fly 651 --CVTLDGDQVSSKGSLTGGYFNTSRSRL--EMQKKRTEY--TSQIAEFEKKLSKLRNELKSTEN 709
Fly 710 NINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTK 774
Fly 775 SSLEAELKQELMSTLSSQDQREIDQLNDDIRRLNQENKEA-FTQR---MQFEVRKNKLDNL---- 831
Fly 832 ---------LINNLFRRRDELIQALQ-EISVEDRK-RKL----NNCKTELVSAEKRIKKVNSDLE 881
Fly 882 EIEKRVMEAVQLQKELQQELETHVRKEKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASL 946
Fly 947 GA-------VPLVDPSYTRMSLKNIFKELEKANQHLKKYNHVNKKALD-QFLSFSEQ--KEKLYR 1001
Fly 1002 RKEEL----DIGDQKIHML--IQSLE--MQKVEAIQFTFRQVAQNFTKVFKKLVPMGAGFLILKT 1058
Fly 1059 KDNE-------GDEMEKE-VENSDAFTGIGIRVSFTGVEAEMREMNQLSGGQKSLVALALIFSIQ 1115
Fly 1116 KCDPAPFYLFDEIDQALDAMHRKAVANMIHELSDTAQFITTTFRPELLENAHKFYGVRFRNKVSH 1180
Fly 1181 IDC 1183 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 299/1298 (23%) |
| ABC_SMC3_euk | 3..>159 | CDD:213239 | 39/170 (23%) | ||
| SMC_hinge | 533..643 | CDD:214944 | 28/118 (24%) | ||
| TMPIT | 678..>760 | CDD:285135 | 14/83 (17%) | ||
| CHD5 | <780..>822 | CDD:282299 | 10/45 (22%) | ||
| P-loop_NTPase | <1088..1182 | CDD:304359 | 34/93 (37%) | ||
| glu | NP_723996.1 | ABC_SMC4_euk | 87..>246 | CDD:213241 | 37/157 (24%) |
| Smc | 89..1281 | CDD:224117 | 297/1294 (23%) | ||
| SMC_hinge | 618..733 | CDD:214944 | 32/138 (23%) | ||
| ATP-synt_B | <825..904 | CDD:304375 | 20/98 (20%) | ||
| ABC_SMC4_euk | <1196..1290 | CDD:213241 | 36/96 (38%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45464468 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.740 | |||||