Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_780660.1 | Gene: | Ckap4 / 216197 | MGIID: | 2444926 | Length: | 575 | Species: | Mus musculus |
Alignment Length: | 649 | Identity: | 129/649 - (19%) |
---|---|---|---|
Similarity: | 252/649 - (38%) | Gaps: | 201/649 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 122 VNLLESAGFSSSNPYYIVKQGKINQMATAADSY----------------RLKLLREVAGT----- 165
Fly 166 RVYDERKEESLNLLRETDSKVEKISEYLKTIEDR-LQTLEEEKEELKEYQKWDKTRRTLEYIRYE 229
Fly 230 TELKDT-KKALDELQLQRKSSSDKKKIYNIEIQKAQEKIKDVQKNLKEAKKKVQSTKEERSVLMT 293
Fly 294 EQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKN----LKVTIAEREKELDDVKPKYEAM 354
Fly 355 KRKEEDCSRELQLKEQKRKELYAKQGRGSQFSSREDRD-KWITNELKSISKQTRDKIAHHAKLVE 418
Fly 419 DLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQL 483
Fly 484 QTHKEELSRADQALRSMAGKPILNGCDSVRKVLDSFVERGGQSAEIARAYYGPVIENFSCDKTIY 548
Fly 549 TAVEVTAANRLFHHIVESEYEGTQILKEMNKL--KLPGEVTFMPLNRLQVKIHDYPDDPDSIPMI 611
Fly 612 SKLKYDEQHDKALRYIFGKTLICRNLERATELAKSTGL---DCVTLDGDQVSSKGSLTGGYFNTS 673
Fly 674 RSRLEMQKK--RTEYTSQIAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKV 735 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 129/649 (20%) |
ABC_SMC3_euk | 3..>159 | CDD:213239 | 5/52 (10%) | ||
SMC_hinge | 533..643 | CDD:214944 | 16/111 (14%) | ||
TMPIT | 678..>760 | CDD:285135 | 14/60 (23%) | ||
CHD5 | <780..>822 | CDD:282299 | |||
P-loop_NTPase | <1088..1182 | CDD:304359 | |||
Ckap4 | NP_780660.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..73 | ||
Smc | <152..433 | CDD:224117 | 77/362 (21%) | ||
alaS | <464..533 | CDD:273026 | 24/119 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167847187 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |