Protein Alignment SMC3 and C44C10.10

DIOPT Version :9

• Sequence 1: NP_523374.2
• Gene: SMC3 / 32627
• FlyBaseID: FBgn0015615
• Length: 1200
• Species: Drosophila melanogaster
• Sequence 2: NP_509954.1
• Gene: C44C10.10 / 183458
• WormBaseID: WBGene00008090
• Length: 127
• Species: Caenorhabditis elegans
• Alignment Length: 55
• Identity: 18/55 - (32%)
• Similarity: 24/55 - (43%)
• Gaps: 2/55 - (3%)

  Fly     6 IIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQ 60
            |.::.|...:| ...|.|.| ...:.|.||.|||....||..:..||.|....:|
 Worm    54 ISVKNFMCLED-VKYESFGK-ITTITGPNGCGKSALVRAIGILTGDEVTESSNQQ 106

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMC3	NP_523374.2	SMC_N	2..1180	CDD:280601	18/55 (33%)
		ABC_SMC3_euk	3..>159	CDD:213239	18/55 (33%)
		SMC_hinge	533..643	CDD:214944
		TMPIT	678..>760	CDD:285135
		CHD5	<780..>822	CDD:282299
		P-loop_NTPase	<1088..1182	CDD:304359
C44C10.10	NP_509954.1	AAA_23	54..>117	CDD:379210	18/55 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1196
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900