Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001359562.1 | Gene: | C44C10.5 / 183454 | WormBaseID: | WBGene00008086 | Length: | 277 | Species: | Caenorhabditis elegans |
Alignment Length: | 367 | Identity: | 71/367 - (19%) |
---|---|---|---|
Similarity: | 143/367 - (38%) | Gaps: | 111/367 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 274 LKEAKKKVQSTKEERSVLMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIA 338
Fly 339 EREKELDDVKPKYEAMKRKEEDCSRELQLKEQKRKELYAKQGRGSQFS----SREDRDKWITNEL 399
Fly 400 KSISKQTRDKIAHHAKLVEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQ 464
Fly 465 HQSMRNELWRKETQMTQQLQTHKEELSRADQALRS--MAGKPILNGCD--SVRKVL------DSF 519
Fly 520 VERGGQSAEIARAYYGPVIENFSCDKT--IYTAVEVTAANRLFH---HIVESEYEGTQILKEMNK 579
Fly 580 LKLPGEVTFMPLNRLQVKIHDYPDDPDSIPMISKLKYDEQHD 621 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 71/367 (19%) |
ABC_SMC3_euk | 3..>159 | CDD:213239 | |||
SMC_hinge | 533..643 | CDD:214944 | 14/94 (15%) | ||
TMPIT | 678..>760 | CDD:285135 | |||
CHD5 | <780..>822 | CDD:282299 | |||
P-loop_NTPase | <1088..1182 | CDD:304359 | |||
C44C10.5 | NP_001359562.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |