Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031758814.1 | Gene: | smc6 / 100495796 | -ID: | - | Length: | 1122 | Species: | Xenopus tropicalis |
Alignment Length: | 1227 | Identity: | 252/1227 - (20%) |
---|---|---|---|
Similarity: | 472/1227 - (38%) | Gaps: | 309/1227 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 IKQIIIQGFKSYKDQTVVEPFDKRHNV--VVGRNGSGKSNFFYAIQFVLSDE--FTHLRPEQRQS 63
Fly 64 LLHEGTGARVIS---------AYVEIIFDNS---DNRVPIDKEEIF-LRRVIGAKKDQYFLNKKV 115
Fly 116 VPRNEVVNLLESAGFSSSNPYYIVKQGKIN---QMATAADSYRLKLLREVAGTRVYDERKEESLN 177
Fly 178 LLRETDSKVEKISEYLKTIEDRLQTLEE---EKEELKEYQKWDKTRRTLEYIRYETELKDTKKAL 239
Fly 240 DELQLQRKSSSDKKKIYNIEIQKAQEKIKD-----------VQKNLKEAKKKVQSTKEERSVLMT 293
Fly 294 EQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKE 358
Fly 359 EDCSRELQLKEQKRKELYAKQGRGSQFSSREDRDKWITNELKSISKQTRDKIAHHAKLVEDLKKD 423
Fly 424 ATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTHKE 488
Fly 489 EL-----SRADQALRSMAGKPILNGCDSVRKVLDSFVERGGQSAEIARAYYGPVIENFSC-DKTI 547
Fly 548 YTAVEVTAANRLFHHIVESEYEGTQILKEMNKLKLPGEVTFMPLNRLQVKIHD-------YPDDP 605
Fly 606 DSI-------PMISKLKYDEQ--------HDKA-LRYIFGKTLICRNLERATELAKSTGLDCVTL 654
Fly 655 DGDQVSSKGSLTGGYFNTSRSRLEMQKKRTEYTSQIAEFEKKLSKLRNELKSTENNINSIVSEMQ 719
Fly 720 KTETKQGKSKDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQE 784
Fly 785 LMSTLSSQDQREIDQLNDDIRRLNQENKEAFTQRMQFEVRKNKLDNLLINNLFRRRDELIQALQE 849
Fly 850 ISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQLQKELQQELETHVRKEKEAEEN 914
Fly 915 LNKDSKQLEKWSTKENMLNEKIDE----CTEKIASLGAVPLVDPSYTRMSLKNIFKEL-EKANQH 974
Fly 975 LKKYNHVNKKALDQFLSFSEQKEKLYRRKEELDIGDQKI-HM-----LIQSLEMQKVEAIQFTFR 1033
Fly 1034 QVAQNFTKVFKKLVPM--GAGFLILKTKDNEGDEMEKEVENSDAFTGIGIRVSFTGVEAEMREMN 1096
Fly 1097 QLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAMHRKAVANMIHELSDTAQF 1153 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 252/1227 (21%) |
ABC_SMC3_euk | 3..>159 | CDD:213239 | 44/175 (25%) | ||
SMC_hinge | 533..643 | CDD:214944 | 24/133 (18%) | ||
TMPIT | 678..>760 | CDD:285135 | 12/81 (15%) | ||
CHD5 | <780..>822 | CDD:282299 | 7/41 (17%) | ||
P-loop_NTPase | <1088..1182 | CDD:304359 | 20/66 (30%) | ||
smc6 | XP_031758814.1 | Smc | 81..1101 | CDD:224117 | 252/1227 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |