Sequence 1: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936738.3 | Gene: | smc2 / 100486893 | XenbaseID: | XB-GENE-5826169 | Length: | 1202 | Species: | Xenopus tropicalis |
Alignment Length: | 1309 | Identity: | 321/1309 - (24%) |
---|---|---|---|
Similarity: | 582/1309 - (44%) | Gaps: | 269/1309 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLS-DEFTHLRPEQRQSL 64
Fly 65 LHEGTGARVISAYVEIIFDNSDNR-VPIDKE---EIFLRR--VIGAKKDQYFLNKKVVPRNEVVN 123
Fly 124 LLESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLNLLRETDSKVEK 188
Fly 189 ISEYLKTIEDRLQTLEEEKEELKEYQKWDKTRRTLE-----YIRY------ETELKDTKKALDEL 242
Fly 243 QLQRKSSSDKKKIYNIEIQKAQEKIKDVQKNLKEAKKKVQSTKEERSVLMTEQQQLLREKTKLDL 307
Fly 308 TIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKEEDCSRELQLKEQKR 372
Fly 373 KELYAKQGRGSQ-FSSREDRDKWITNELKSISKQTRDKIA--------HHAKLVEDLKKDATSEK 428
Fly 429 D--LGQ------KIEEHSSELEQLRLQI----DEHNKKYYELKKTKDQHQSMRNELWRKETQMTQ 481
Fly 482 QLQTHKEELS----RADQALRSMAGKPILNGCDSVRKVLDSFV-------------ERGGQSAEI 529
Fly 530 ARAYYGPVIENFSC-DKTIYTAVEVTAANRLFHHIVESEYEGTQILKEMNKLKLPGEVTFMPLNR 593
Fly 594 LQ--------VKIHDYPDDPDSIPM-ISKLKYDEQHDKALRYIFGKTLICRNLERATELA--KST 647
Fly 648 GLDCVTLDGDQVSSKGSLTGGYFNTSRSRL-----------EMQKKRTEYTSQIAEFEKKLSKLR 701
Fly 702 N------------ELKSTE-----------------NNINSIVSEMQKTETKQGKSKDVFEKVQG 737
Fly 738 EIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTLSSQDQREIDQLND 802
Fly 803 DIRRLNQENKEAFTQRMQFEVRKNKLDNLLINNLFRRRDELIQALQEISVEDRKRKLNNCKTELV 867
Fly 868 SAEKRIKKVNSDL-----------EEIEKRVMEAVQLQKELQQELETHVRKEKEAEENLNKDSKQ 921
Fly 922 LEKWSTK-ENMLNEKIDECTEKIASLGAVPLVDPSYTRMSLKNIFKELEKANQHLKKY------- 978
Fly 979 -NHVNKKALDQFLSFSEQKEKLYRRKEELDIGDQKIHMLIQSLEMQKVEAIQFTFRQVAQNFTKV 1042
Fly 1043 FKKLVPMGAGFLILKTKDNEGDEMEKEVENSDAFTGIGIRVSFTGVEAEMREMNQLSGGQKSLVA 1107
Fly 1108 LALIFSIQKCDPAPFYLFDEIDQALDAMHRKAVANMIHELSDTAQFITTTFRPELLENAHKFYGV 1172
Fly 1173 RFRNKVSHI 1181 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 319/1305 (24%) |
ABC_SMC3_euk | 3..>159 | CDD:213239 | 56/162 (35%) | ||
SMC_hinge | 533..643 | CDD:214944 | 34/119 (29%) | ||
TMPIT | 678..>760 | CDD:285135 | 23/110 (21%) | ||
CHD5 | <780..>822 | CDD:282299 | 8/41 (20%) | ||
P-loop_NTPase | <1088..1182 | CDD:304359 | 33/94 (35%) | ||
smc2 | XP_002936738.3 | Smc | 1..1168 | CDD:224117 | 321/1307 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D119789at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |