DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGBE and GLC3

DIOPT Version :9

Sequence 1:NP_788342.1 Gene:AGBE / 326264 FlyBaseID:FBgn0053138 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_010905.1 Gene:GLC3 / 856705 SGDID:S000000737 Length:704 Species:Saccharomyces cerevisiae


Alignment Length:700 Identity:389/700 - (55%)
Similarity:488/700 - (69%) Gaps:29/700 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DIEKLFETDGYLRPFEHEIRRRHGVLEDWLNKINQS--EGGLDGFS----TAYKHYGLHFQPDNS 64
            :::...|.|.:|:||...:..|..:.:.||..|..:  :|.....|    .:||.||||..|:..
Yeast     7 NVKGAVEFDPWLKPFADVLSERRYLADKWLYDITHATPDGSYQSLSKFARDSYKSYGLHANPETK 71

  Fly    65 VIA-REWAPGARDVYLTGDFNNWHWESHPFKKLD-FGKWELHLPPNEDGSPAIKHLSEIKIIIRN 127
            .|. :||||.|...:|.||||||...||..|..| ||.:.:.|.|..:|..||.|.|:||::...
Yeast    72 EITYKEWAPNAERAFLVGDFNNWDTTSHELKNKDEFGNFTITLHPLPNGDFAIPHDSKIKVMFIL 136

  Fly   128 HSGQLLDRLSPWAKYVVQPPKSANQ--GVNYKQYVWEPPSYERYQRQHPGPPRPK------SLRI 184
            ..|..:.||..|.....||.|..::  |..|:...|.|.:  .|:..|   ||||      ||||
Yeast   137 PDGSKIFRLPAWITRATQPSKETSKQFGPAYEGRFWNPEN--PYKFVH---PRPKFSESVDSLRI 196

  Fly   185 YECHVGIASQEPRVGSYDEFADRIVPRIKRQGYNCIQVMAIMEHAYYASFGYQVTSFYAASSRYG 249
            ||.||||:|.||::.:|.||.::::||||..||:.||:|||||||||||||||||:|:|||||:|
Yeast   197 YEAHVGISSPEPKITTYKEFTEKVLPRIKYLGYDAIQLMAIMEHAYYASFGYQVTNFFAASSRFG 261

  Fly   250 NPEQLKRMIDVAHSHGLFVLLDVVHSHASKNVQDGLNQFDGTNSCFFH--DGARGEHSLWDSRLF 312
            .||:||.:||.|||.|:.||||||||||||||:||||.|||::..:||  ...||||.|||||||
Yeast   262 TPEELKELIDTAHSMGILVLLDVVHSHASKNVEDGLNMFDGSDHQYFHSISSGRGEHPLWDSRLF 326

  Fly   313 NYVEYEVLRFLLSNLRWWHDEYNFDGYRFDGVTSMLYHSRGIGEG--FSGDYNEYFGLN---VDT 372
            ||.::||.||||:||.::.|.|.|||:||||||||||...|:|.|  ||||||||...:   ||.
Yeast   327 NYGKFEVQRFLLANLAFYVDVYQFDGFRFDGVTSMLYVHHGVGAGGSFSGDYNEYLSRDRSFVDH 391

  Fly   373 DALNYLGLANHLLH-TIDSRIITIAEDVSGMPTLCRPVSEGGIGFDYRLGMAIPDKWIELLKEQS 436
            :||.||.|||.|:| .:.:..:|:||||||.||||.|.|.||.||||||.||:||.||:|:||:.
Yeast   392 EALAYLMLANDLVHEMLPNLAVTVAEDVSGYPTLCLPRSIGGTGFDYRLAMALPDMWIKLIKEKK 456

  Fly   437 DDEWDMGNLVHTLTNRRWMENTVAYAESHDQALVGDKTIAFWLMDKEMYTHMSTLSDSSVIIDRG 501
            ||||:||::|:||||||:.|..|||.||||||||||||:||||||..|||.|:.|.:.|::||||
Yeast   457 DDEWEMGSIVYTLTNRRYGEKVVAYCESHDQALVGDKTLAFWLMDAAMYTDMTVLKEPSIVIDRG 521

  Fly   502 LALHKMIRLITHALGGEAYLNFMGNEFGHPEWLDFPRVGNNDSYHYARRQWNLVDDDLLKYKYLN 566
            :|||||||||||:|||||||||.|||||||||||||.|.|.|||.|||||:||.||.||:|:.||
Yeast   522 IALHKMIRLITHSLGGEAYLNFEGNEFGHPEWLDFPNVNNGDSYKYARRQFNLADDPLLRYQNLN 586

  Fly   567 EFDRAMNEAEERYGWLHSGPAWVSWKHEGDKIIAFERAGLVFVFNFHPQQSFTGYRVGTNWAGTY 631
            ||||:|...|:|:.||::..|:||.||||||:|.|||..|:|:|||||..|::.||||...||||
Yeast   587 EFDRSMQLCEKRHKWLNTKQAYVSLKHEGDKMIVFERNNLLFIFNFHPTNSYSDYRVGVEKAGTY 651

  Fly   632 QAVLSSDDPLFGGHNRIDANCKHPSNPEGYAGRSNFIEVYTPSRTAVVYA 681
            ..||:||...|||||||:.:.:..:....:..|.||::||.|||.|:|.|
Yeast   652 HIVLNSDRAEFGGHNRINESSEFFTTDLEWNNRKNFLQVYIPSRVALVLA 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGBENP_788342.1 GlgB 52..682 CDD:223373 377/647 (58%)
E_set_GBE_euk_N 62..161 CDD:199884 37/102 (36%)
AmyAc_bac_euk_BE 167..570 CDD:200460 274/416 (66%)
Alpha-amylase_C 588..683 CDD:280898 49/93 (53%)
GLC3NP_010905.1 PLN02447 9..702 CDD:215246 388/697 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341780
Domainoid 1 1.000 402 1.000 Domainoid score I85
eggNOG 1 0.900 - - E1_COG0296
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H129
Inparanoid 1 1.050 753 1.000 Inparanoid score I72
Isobase 1 0.950 - 0 Normalized mean entropy S339
OMA 1 1.010 - - QHG54296
OrthoFinder 1 1.000 - - FOG0002879
OrthoInspector 1 1.000 - - oto99779
orthoMCL 1 0.900 - - OOG6_101128
Panther 1 1.100 - - LDO PTHR43651
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2134
SonicParanoid 1 1.000 - - X2709
TreeFam 1 0.960 - -
1615.740

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