DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGBE and aah3

DIOPT Version :9

Sequence 1:NP_788342.1 Gene:AGBE / 326264 FlyBaseID:FBgn0053138 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_587976.1 Gene:aah3 / 2539415 PomBaseID:SPCC63.02c Length:564 Species:Schizosaccharomyces pombe


Alignment Length:425 Identity:87/425 - (20%)
Similarity:140/425 - (32%) Gaps:143/425 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 IKRQGYNCIQVMAI-------MEHAYYASFGYQVTSFYAASSRYGNPEQLKRMIDVAHSHGLFVL 269
            |:..|:|.|.:..|       ::.|.||..||..|.:.:.:..:|..:.|..:|..||..|::|:
pombe    73 IEDMGFNAIWISPIDKNIEGDIDGAGYAYHGYWNTDYESLNEHFGTEDDLVSLITAAHKAGIWVM 137

  Fly   270 LD-VVHSHA-SKNVQD----GLNQFDGTNSCFFH----------DGARGEHSLW-DSRL----FN 313
            || :|:|.| :..:.|    .||.|:  ...:||          |........| ||.:    .:
pombe   138 LDSIVNSMALAPPLADADYSSLNPFN--KESYFHPYCLIDWDITDNETNVMDCWQDSGVLLADLD 200

  Fly   314 YVEYEVLRFLLSNLRWWHDEYNFDGYRFDGVTSMLY-------HSRG---IGEGFSGD------- 361
            ....:|..:|..:.:....:|:|||.|.|.|..|.|       .:.|   :||.||.|       
pombe   201 VESSDVSSYLSDHFKSLISKYDFDGLRIDAVKMMNYTFFPDFVDATGVYSVGEVFSYDPDTMCSY 265

  Fly   362 --------------------------------YNEYFGLNVD--TDALNYLGLANHLL-----HT 387
                                            |.|....|..  ...|....:.||.|     :|
pombe   266 MSVLPGVTNYFLQLYINFSFTATGAGFTLIPTYQEVMASNCSKYDSTLMLTFIENHDLYRFPYYT 330

  Fly   388 ID-SRIITIAEDV---SGMPTLCRPVSEGGIGFDYRLGMAIPDKWIELLKEQSDDEWDMGNLVHT 448
            .| |:|:.....|   .|:|::.....:|..|.:.....  |..|:        .::|..|..:|
pombe   331 SDQSQIMGALSFVLIWDGIPSIFYGQEQGFNGGEDPANR--PALWL--------TDYDQSNPYYT 385

  Fly   449 LTNRR-------------WMENTVAYAESHDQALVGDKTIAFWLMDKEMYTHMSTLSDSSVIIDR 500
            :....             |:.:|....||.....||.|....     .|:.:|...::.::.   
pombe   386 VIKTMVAFRKFVITQDPDWVTSTYQSIESAVDHYVGQKNDVL-----VMFNNMGVTNNLTIY--- 442

  Fly   501 GLALHKMIRLITHALGGEAYLNFMGNE-----FGH 530
                             |...|:..||     |||
pombe   443 -----------------EVETNYTANEVVSDVFGH 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGBENP_788342.1 GlgB 52..682 CDD:223373 87/425 (20%)
E_set_GBE_euk_N 62..161 CDD:199884
AmyAc_bac_euk_BE 167..570 CDD:200460 87/425 (20%)
Alpha-amylase_C 588..683 CDD:280898
aah3NP_587976.1 AmyAc_euk_AmyA 23..400 CDD:200458 71/338 (21%)
Alpha-amylase 61..366 CDD:278554 66/294 (22%)
DUF1966 <426..491 CDD:286359 9/60 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2134
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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