DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGBE and gbe1

DIOPT Version :9

Sequence 1:NP_788342.1 Gene:AGBE / 326264 FlyBaseID:FBgn0053138 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_012813413.2 Gene:gbe1 / 100494084 XenbaseID:XB-GENE-980510 Length:686 Species:Xenopus tropicalis


Alignment Length:683 Identity:423/683 - (61%)
Similarity:527/683 - (77%) Gaps:6/683 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EAKDIEKLFETDGYLRPFEHEIRRRHGVLEDWLNKINQSEGGLDGFSTAYKHYGLHFQPDNSVIA 67
            |..:::.|...|.||:|:|.:.|||:|:....|..|..:||||:.||.:|:.:|:|...:..:..
 Frog     9 EVPELKVLLGQDSYLKPYEKDFRRRYGLFCRLLKSIEGNEGGLEKFSRSYQSFGIHLLENGGICC 73

  Fly    68 REWAPGARDVYLTGDFNNWHWESHPFKKLDFGKWELHLPPNEDGSPAIKHLSEIKIIIRNHSGQL 132
            :||||||..|:||||||.|:..|||:||:|:||||||:||.||.|..|.|.|::|::|.:.||:.
 Frog    74 KEWAPGAEAVFLTGDFNGWNPFSHPYKKMDYGKWELHIPPREDKSAIIPHGSKLKVVITSKSGET 138

  Fly   133 LDRLSPWAKYVVQPPKSANQGVNYKQYVWEPPSYERYQRQHPGPPRPKSLRIYECHVGIASQEPR 197
            |.|:|||||||:   :..|:.| |....||||  :.|:|:|..|.:.||:||||.||||||.|.|
 Frog   139 LYRISPWAKYVI---REDNKAV-YDWIHWEPP--QPYKRKHASPKKLKSVRIYESHVGIASSEGR 197

  Fly   198 VGSYDEFADRIVPRIKRQGYNCIQVMAIMEHAYYASFGYQVTSFYAASSRYGNPEQLKRMIDVAH 262
            :.||..|...::|:||..||||||:|||||||||||||||||||:|||||:|.|::||.:|||||
 Frog   198 IASYKNFTYNVLPKIKDLGYNCIQMMAIMEHAYYASFGYQVTSFFAASSRFGTPDELKELIDVAH 262

  Fly   263 SHGLFVLLDVVHSHASKNVQDGLNQFDGTNSCFFHDGARGEHSLWDSRLFNYVEYEVLRFLLSNL 327
            |.|:.|||||||||||||.:||||:|||||:|||||||||.|.|||||||:|..:||||||||||
 Frog   263 SMGIQVLLDVVHSHASKNSEDGLNKFDGTNACFFHDGARGNHDLWDSRLFDYSNWEVLRFLLSNL 327

  Fly   328 RWWHDEYNFDGYRFDGVTSMLYHSRGIGEGFSGDYNEYFGLNVDTDALNYLGLANHLLHTIDSRI 392
            |||.:||.|||:|||||||||||..|||.||||||||||||.||.|:|.||.||||:.||:....
 Frog   328 RWWLEEYGFDGFRFDGVTSMLYHHHGIGCGFSGDYNEYFGLQVDEDSLVYLMLANHMTHTLYPDS 392

  Fly   393 ITIAEDVSGMPTLCRPVSEGGIGFDYRLGMAIPDKWIELLKEQSDDEWDMGNLVHTLTNRRWMEN 457
            |||||||||||.||.|:|:||.||||||.||:|||||::|||..|:||||||:||||||||:.|.
 Frog   393 ITIAEDVSGMPALCCPISQGGTGFDYRLAMAVPDKWIQILKELKDEEWDMGNIVHTLTNRRYNEK 457

  Fly   458 TVAYAESHDQALVGDKTIAFWLMDKEMYTHMSTLSDSSVIIDRGLALHKMIRLITHALGGEAYLN 522
            .:|||||||||||||||:||||||.||||:||.:|..:.:||||:.||||:|||||.||||.|||
 Frog   458 CIAYAESHDQALVGDKTLAFWLMDAEMYTNMSVMSPLTPVIDRGIQLHKMLRLITHGLGGEGYLN 522

  Fly   523 FMGNEFGHPEWLDFPRVGNNDSYHYARRQWNLVDDDLLKYKYLNEFDRAMNEAEERYGWLHSGPA 587
            |:||||||||||||||.||.:||||||||::|:||:.|:|::|..|||.||:.||::|||.:..|
 Frog   523 FIGNEFGHPEWLDFPRKGNGESYHYARRQFHLIDDNQLRYRFLYAFDRDMNKLEEKFGWLAAPQA 587

  Fly   588 WVSWKHEGDKIIAFERAGLVFVFNFHPQQSFTGYRVGTNWAGTYQAVLSSDDPLFGGHNRIDANC 652
            ::|.|||.|||||||||.|:|:|||||.:||||||||.|..|.:...|.:|...:|||.||:...
 Frog   588 YISAKHEDDKIIAFERANLLFIFNFHPYKSFTGYRVGVNTHGKFMIALDTDASEYGGHERINHKT 652

  Fly   653 KHPSNPEGYAGRSNFIEVYTPSRTAVVYARVSD 685
            :..:....|.|.|:.:.||.|.|.|:|.:.|.:
 Frog   653 EFFTEHSPYNGCSHSLLVYIPCRVALVLSNVDN 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGBENP_788342.1 GlgB 52..682 CDD:223373 403/629 (64%)
E_set_GBE_euk_N 62..161 CDD:199884 50/98 (51%)
AmyAc_bac_euk_BE 167..570 CDD:200460 290/402 (72%)
Alpha-amylase_C 588..683 CDD:280898 46/94 (49%)
gbe1XP_012813413.2 PLN02447 20..684 CDD:215246 420/669 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 426 1.000 Domainoid score I608
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H129
Inparanoid 1 1.050 900 1.000 Inparanoid score I377
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147330at33208
OrthoFinder 1 1.000 - - FOG0002879
OrthoInspector 1 1.000 - - oto104150
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2134
SonicParanoid 1 1.000 - - X2709
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

Return to query results.
Submit another query.