DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33128 and Pga3

DIOPT Version :10

Sequence 1:NP_787961.1 Gene:CG33128 / 326263 FlyBaseID:FBgn0053128 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_068521.1 Gene:Pga3 / 60372 RGDID:621573 Length:387 Species:Rattus norvegicus


Alignment Length:423 Identity:154/423 - (36%)
Similarity:226/423 - (53%) Gaps:55/423 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKWLVLLTILALVS--AEIHRIKIHKNQDHKNTRQHRKQAIQALKLKYHQQDVVIIYDDGVPIYM 64
            :|||.:|.::||..  .:|..:||      |:.|::.:::                       :|
  Rat     1 MKWLWVLGLVALSECLVKIPLMKI------KSMRENLRES-----------------------HM 36

  Fly    65 QPDYGYDYP---------SQTSVDYTSEELGNSMNMYYYGLIGIGTPEQYFKVVFDTGSANLWVP 120
            ..||...||         .:.:...|.|.:.|.:::.|.|.|.||||.|.||||.||||::||||
  Rat    37 LKDYLEKYPRSRAHVLLEQRRNPSVTYEPMRNYLDLVYIGTISIGTPPQEFKVVLDTGSSDLWVP 101

  Fly   121 SAQCLATDVACQQHNQYNSSASSTFVSSGQNFSIQYGTGSVSGYLAIDTVTINGLAIANQTFGEA 185
            |..|  :..||..|..:|...||||:.||:..::.||:|.:||:||.|||.|..|.:..|.||.:
  Rat   102 SIYC--SSPACAHHKVFNPLQSSTFLVSGRPVNVAYGSGEMSGFLAYDTVKIGDLTVVAQAFGLS 164

  Fly   186 VSQPGASFTDVAFDGILGMGYQQIAEDNVVPPFYNLYEEGLIDEPVFGFYLARNGSAVDGGQLTL 250
            :.:||.......||||||:||..:....|.|.|.||:.:|||.:.:|.|||:....  .|..|.|
  Rat   165 LEEPGRFMEHAVFDGILGLGYPNLGLQGVTPVFDNLWIQGLIPQNLFAFYLSSKDE--KGSVLML 227

  Fly   251 GGTDQNLIAGEMTYTPVTQQGYWQFAVNNITWNGTVIS--SGCQAIADTGTSLIAAPSAAYIQLN 313
            ||.|.:...||:.:.||::..|||.||::|:.||.:|:  .|||.|.||||||:..|.::.:.:.
  Rat   228 GGVDPSYYHGELHWVPVSKPSYWQLAVDSISMNGEIIACDGGCQGIMDTGTSLVTGPRSSILNIQ 292

  Fly   314 NLIGG-VPIQGDYYVPCSTVSSLPVLTINIGGTNFYLPPSVYIQTYTEGNYTTCMSTF---TDIG 374
            ||||. ....|:|::.|.|:::||.:...|....:.:|.|.||:.....|   |.|.|   ||..
  Rat   293 NLIGAKASGDGEYFLKCDTINTLPDIVFTIDSVTYPVPASAYIRKDHSHN---CRSNFEESTDDP 354

  Fly   375 TG--FWILGDVFLGQYYSEFDFGQNRVGFATLA 405
            :.  .|:||||||..|::.||...||:|.|:.|
  Rat   355 SDPELWVLGDVFLRLYFTVFDRANNRIGLASAA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33128NP_787961.1 pepsin_retropepsin_like 83..403 CDD:472175 135/327 (41%)
Pga3NP_068521.1 A1_Propeptide 18..44 CDD:462326 8/54 (15%)
pepsin_retropepsin_like 64..385 CDD:472175 135/327 (41%)

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