DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33128 and Cym

DIOPT Version :10

Sequence 1:NP_787961.1 Gene:CG33128 / 326263 FlyBaseID:FBgn0053128 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_064476.2 Gene:Cym / 56825 RGDID:708486 Length:379 Species:Rattus norvegicus


Alignment Length:405 Identity:155/405 - (38%)
Similarity:225/405 - (55%) Gaps:38/405 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WLVLLTILALVSAE-IHRIKIHKNQDHKNTRQHRKQAIQALKLKYHQQDVVIIYDDGVPIYMQPD 67
            :::||.:||:..:. :.||.:||.:..:||.  ::|.:....|:.||                  
  Rat     4 FVLLLAVLAIAQSHVVTRIPLHKGKSLRNTL--KEQGLLEDFLRRHQ------------------ 48

  Fly    68 YGYDYPSQTS--VDYTSEELGNSMNMYYYGLIGIGTPEQYFKVVFDTGSANLWVPSAQCLATDVA 130
              |::..:.|  ....||.|.|.::..|:|||.:|||.|.|||||||||:.|||||..|  :...
  Rat    49 --YEFSEKNSNIGVVASEPLTNYLDSEYFGLIYVGTPPQEFKVVFDTGSSELWVPSVYC--SSKV 109

  Fly   131 CQQHNQYNSSASSTFVSSGQNFSIQYGTGSVSGYLAIDTVTINGLAIANQTFGEAVSQPGASFTD 195
            |:.||:::.|.|.||.:..:...:|||||||.|:||.||||::.:.:.:||.|.:..:||..||.
  Rat   110 CRNHNRFDPSKSFTFQNLSKPLFVQYGTGSVEGFLAYDTVTVSDIVVPHQTVGLSTEEPGDIFTY 174

  Fly   196 VAFDGILGMGYQQIAEDNVVPPFYNLYEEGLIDEPVFGFYLARNGSAVDGGQLTLGGTDQNLIAG 260
            ..||||||:.|...|....||.|.|:....|:.:.:|..|::||.   .|..||||..||:...|
  Rat   175 SPFDGILGLAYPTFASKYSVPIFDNMMNRHLVAQDLFSVYMSRND---QGSMLTLGAIDQSYFIG 236

  Fly   261 EMTYTPVTQQGYWQFAVNNITWNGTVIS--SGCQAIADTGTSLIAAPSAAYIQLNNLIGGVPIQG 323
            .:.:.|||.||||||.|:.||.|..|::  .||.|:.||||:|:..|....:.:.:.||.|..|.
  Rat   237 SLHWVPVTVQGYWQFTVDRITINDEVVACQGGCPAVLDTGTALLTGPGRDILNIQHAIGAVQGQH 301

  Fly   324 DYY-VPCSTVSSLPVLTINIGGTNFYLPPSVYIQTYTEGNYTTCMSTFTDIGTGFWILGDVFLGQ 387
            |.: :.|..::.:|.:...|.|..|.||||.|...: :|   :|.|.|.. |:..|||||||:.:
  Rat   302 DQFDIDCWRLNFMPTVVFEINGREFPLPPSAYTNQF-QG---SCSSGFRH-GSQMWILGDVFIRE 361

  Fly   388 YYSEFDFGQNRVGFA 402
            :||.||...||||.|
  Rat   362 FYSVFDRANNRVGLA 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33128NP_787961.1 pepsin_retropepsin_like 83..403 CDD:472175 138/323 (43%)
CymNP_064476.2 A1_Propeptide 21..47 CDD:462326 8/27 (30%)
pepsin_retropepsin_like 64..377 CDD:472175 138/323 (43%)

Return to query results.
Submit another query.