DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33128 and CG5860

DIOPT Version :10

Sequence 1:NP_787961.1 Gene:CG33128 / 326263 FlyBaseID:FBgn0053128 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster


Alignment Length:353 Identity:125/353 - (35%)
Similarity:189/353 - (53%) Gaps:19/353 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 VPIYMQPDYGYDYPSQTSVDYTSEELGNSM----------NMYYYGLIGIGTPEQYFKVVFDTGS 114
            ||:|::..:.   .|:..:..::.|.|.::          ||.|||.|.:|.|.|.|.|:|||||
  Fly    24 VPLYVRRSFN---ESEVFLARSATEGGETLQLQLLLQTHNNMEYYGTIAMGNPRQNFTVIFDTGS 85

  Fly   115 ANLWVPSAQCLATDVACQQHNQYNSSASSTFVSSGQNFSIQYGTGSVSGYLAIDTVTINGLAIAN 179
            :|.|:||..|..::.|||.|.:||||.||:::..|:||:::||:|.|.|||:.||:.|.|..:.:
  Fly    86 SNTWLPSVNCPMSNSACQNHRKYNSSRSSSYIPDGRNFTLRYGSGMVVGYLSKDTMHIAGAELPH 150

  Fly   180 QTFGEAVSQPGASFTDVAFDGILGMGYQQIAEDNVVPPFYNLYEEGLIDEPVFGFYLARNGSAVD 244
            .||||::.....:|:.|.|||::|:|...::..|..|....|..:.|:::.||..||.|     |
  Fly   151 FTFGESLFLQHFAFSSVKFDGLVGLGLGVLSWSNTTPFLELLCAQRLLEKCVFSVYLRR-----D 210

  Fly   245 GGQLTLGGTDQNLIAGEMTYTPVTQQGYWQFAVNNITWNGTVISSGCQAIADTGTSLIAAPSAAY 309
            ..::..||.|::...|::.|.||:|...|...::..:.....|.....||.||||||:..|...|
  Fly   211 PREIVFGGFDESKFEGKLHYVPVSQWHTWSLQISKSSVGTKQIGGKSNAILDTGTSLVLVPQQTY 275

  Fly   310 IQLNNLIGGVPIQGDYYVPCSTVSSLPVLTINIGGTNFYLPPSVYIQTYTEGNYTTCMSTFTDIG 374
            ..|.|.: ...:|..|:|......|||.:.|.||...|.|..|.||..........|:.....|.
  Fly   276 HNLLNTL-SAKLQNGYFVVACKSGSLPNINILIGDKVFPLTSSDYIMEVLLDRKPACVLAIAPIN 339

  Fly   375 TGFWILGDVFLGQYYSEFDFGQNRVGFA 402
            .|||:|||:||.:||:.||..:.|:|.|
  Fly   340 RGFWVLGDIFLRRYYTVFDATEKRIGLA 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33128NP_787961.1 pepsin_retropepsin_like 83..403 CDD:472175 121/330 (37%)
CG5860NP_650622.1 Asp 63..369 CDD:394983 117/311 (38%)

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