DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33128 and bace2

DIOPT Version :10

Sequence 1:NP_787961.1 Gene:CG33128 / 326263 FlyBaseID:FBgn0053128 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001135590.1 Gene:bace2 / 100216145 XenbaseID:XB-GENE-1014090 Length:499 Species:Xenopus tropicalis


Alignment Length:368 Identity:92/368 - (25%)
Similarity:158/368 - (42%) Gaps:75/368 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GNSMNMYYYGLIGIGTPEQYFKVVFDTGSANLWVPSAQCLATDVACQQHNQYNSSASSTFVSSGQ 150
            |:|...||..|: ||||.|...::.||||:|..|..|  |..|:.    ..::|..|:::.....
 Frog    69 GDSGRGYYLELL-IGTPPQKMNILVDTGSSNFAVAGA--LNPDIT----TFFDSKLSTSYEPLNT 126

  Fly   151 NFSIQYGTGSVSGYLAIDTVT----INGLAIANQTFGEAVSQPGASFTDVAFDGILGMGYQQIAE 211
            ..:::|..||.:|.|..|.::    :||..:.|  .............::.:.||||:.|..:|:
 Frog   127 QVTVRYTQGSWTGLLGKDVISMPKGVNGTFLIN--IASIFQSENFFLPNINWQGILGLAYSTLAK 189

  Fly   212 -DNVVPPFYN--LYEEGLIDEPVFGFYLARNGS-----AVDGGQLTLGGTDQNLIAGEMTYTPVT 268
             .:.|.||::  :.:|.:.:  :|...:...|.     .::.|.|.|||.:.:|..|::.|||:|
 Frog   190 PSSSVEPFFDSLVQQENIPN--IFSMQMCGAGQPSPGIGINAGSLVLGGIEPSLYQGDIWYTPIT 252

  Fly   269 QQGYWQFAV-------NNITWNGTVISSGCQAIADTGTSLIAAPSAAYIQLNNLIGGVPIQGDYY 326
            ::.|:|..|       .|:..:.||.:|. :||.|:||:|:..|...:   |.::       |..
 Frog   253 EEWYYQVEVLKFEVGGQNLNLDCTVYNSD-KAIVDSGTTLLRLPDKVF---NAMV-------DAI 306

  Fly   327 VPCSTVSS-----------------------LPVLTINIGGTN------FYLPPSVYIQ---TYT 359
            |..|.:.:                       .|.::|.:..||      ..|.|.:|||   |:.
 Frog   307 VQTSLIQNFNAEFWAGLQLACWDKTQDPWNYFPDISIYLRDTNSSRSFRLTLKPQLYIQSVLTFQ 371

  Fly   360 EGNYTTCMSTFTDIGTGFWILGDVFLGQYYSEFDFGQNRVGFA 402
            |.  ..|............::|...:..:|..||..:.|||||
 Frog   372 ES--LNCFRFGISQSASALVIGATVMEGFYVIFDRAEKRVGFA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33128NP_787961.1 pepsin_retropepsin_like 83..403 CDD:472175 92/368 (25%)
bace2NP_001135590.1 beta_secretase_like 72..433 CDD:133140 90/365 (25%)

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