DRSC/TRiP Functional Genomics Resources

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Protein Alignment LeuRS and lars1b

DIOPT Version :9

Sequence 1:NP_001285589.1 Gene:LeuRS / 326262 FlyBaseID:FBgn0284253 Length:1182 Species:Drosophila melanogaster
Sequence 2:XP_698279.6 Gene:lars1b / 569778 ZFINID:ZDB-GENE-030114-7 Length:1176 Species:Danio rerio


Alignment Length:1186 Identity:699/1186 - (58%)
Similarity:899/1186 - (75%) Gaps:19/1186 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TERKGTFKVEYLQKIEREVQQRWEAERVHESDAP-TAPKKRQAEKFFVTFPFPYMNGRLHLGHTF 67
            ||||||.|:::|:|||.||||:||.:::.|::|| |..:.....|:|:|||:|||||||||||||
Zfish     2 TERKGTAKLDFLKKIEEEVQQKWEQDKLFENEAPATIGENTNKNKYFITFPYPYMNGRLHLGHTF 66

  Fly    68 SLSKAEYSMRYHRLKGRRVLWPFGFHCTGMPIKACADKLTRELEQFGFPPQFPETEEVVPVAAEA 132
            .|||.|:::.|.||||::.|:|||.||||||||||||||.||:|.:|:||||||.:|......:.
Zfish    67 CLSKCEFAVGYQRLKGKQCLFPFGLHCTGMPIKACADKLKREMELYGYPPQFPEEDEEEEEQKKT 131

  Fly   133 ASEV-PKDKSKGKKSKAVAKTGAAKYQWQIMQSLGLKDEEIKDFANAEHWLNYFPPLAVQDLKRI 196
            :.:| .|||:||||||||||:|::|:||.||:||||:|.||..||.|||||:|||||||:||||:
Zfish   132 SDDVIIKDKTKGKKSKAVAKSGSSKFQWDIMKSLGLQDAEIVKFAEAEHWLDYFPPLAVEDLKRM 196

  Fly   197 GVHVDWRRTFITTDANPYFDSFVRWQFNHLKERGKIMYGKRYTIYSPKDGQPCMDHDRSSGEGVG 261
            |:.|||||:|||||.||::||||||||.:||||.||.:||||||||||||||||||||.:|||||
Zfish   197 GLKVDWRRSFITTDVNPFYDSFVRWQFINLKERKKIKFGKRYTIYSPKDGQPCMDHDRQTGEGVG 261

  Fly   262 PQEYTLIKMKVLE-VPKALSSIK-QPIFMVAATLRPETMYGQTNCWLHPDIKYIAWQANKNNEVW 324
            |||||||||||:| .|..|.::| :.:|:||||||||||:||||||:.||:||:.:: ..|.:::
Zfish   262 PQEYTLIKMKVVEPYPTKLGALKGKTVFLVAATLRPETMFGQTNCWIRPDMKYVVFE-TANGDLF 325

  Fly   325 VSTRRAARNMTYQGFTAVEGEIKVLAEVTGQDLLGVPLSAPLTKHKVVYSLPMLSIKEDKGTGVV 389
            :||:|:||||:|||||...|.:.|:..:.|||:||..||||||.:|.:|:||||:||||||||||
Zfish   326 ISTQRSARNMSYQGFTKENGVVPVIMNIMGQDILGCALSAPLTSYKTIYALPMLTIKEDKGTGVV 390

  Fly   390 TSVPSDSPDDYAALVDLQKKEAFRQKYGLKDEMVLPYEPIPIIEVPTLGKLSAVHAYETLKIQSQ 454
            ||||||:|||.|||.|::||:|.|:|||::|.||||:||:||||:|..|.|||....:.||||||
Zfish   391 TSVPSDAPDDIAALRDIKKKQALREKYGIQDFMVLPFEPVPIIEIPGYGNLSAPLVCDELKIQSQ 455

  Fly   455 NDKDKLAEAKEMCYLKSFYDGVMLVGAFAGRKIQDVKKDLQKRLVDANEADVYYEPEKTIMSRSA 519
            ||::|||||||..|||.||:|:|||..|.|:|:|||||.:||.:|:..||.:|.||||.::||||
Zfish   456 NDREKLAEAKEKVYLKGFYEGIMLVEGFKGQKVQDVKKPIQKMMVEKGEALIYMEPEKQVLSRSA 520

  Fly   520 DECVVALCNQWYLNYGEPEWQAQATKILHGMETFHEEARNNFEACLNWLHEYACSRTYGLGTKLP 584
            ||||||||:||||:||..||:.||..:|..:|||.:|.|.||||.|.||.|:||||||||||:||
Zfish   521 DECVVALCDQWYLDYGNEEWKKQAHGVLEHLETFCDETRKNFEATLAWLQEHACSRTYGLGTRLP 585

  Fly   585 WDDKWLIESLSDSTIYMAFYTVVHLLQGGTFRGEKPGPFGIKPSDMTGEIWDYIFFKETPLPKKT 649
            |:::||||||||||||||:|||.||||||...|:.|.|.||:|..||.|:|||||||.:|.| ||
Zfish   586 WNEQWLIESLSDSTIYMAYYTVAHLLQGGVLSGQGPSPLGIRPQQMTREVWDYIFFKTSPFP-KT 649

  Fly   650 AIKQEHLAVLRREFEYWYPMDLRVSGKDLIQNHLTFCLYNHAAIWPNDENKWPKGMRVNGHLLLN 714
            .|.:|||..||||||:|||:|:|||||||:.|||::.||||.|:||||..|||:.:|.|||||||
Zfish   650 DIPKEHLLKLRREFEFWYPVDVRVSGKDLVPNHLSYYLYNHVAMWPNDSGKWPQAVRANGHLLLN 714

  Fly   715 SAKMSKSDGNFLTLTEAVDKFSADGMRLCLADAGDSVEDANFVESTADAGILRLYTFIEWVKEML 779
            |.|||||.||||||::|:.|||||||||.||||||:||||||||:.||||||||:|::||||||:
Zfish   715 SEKMSKSTGNFLTLSQAIAKFSADGMRLALADAGDTVEDANFVEAMADAGILRLFTWVEWVKEMI 779

  Fly   780 ENRSSLRKGTDKTFNDQVFLSELNLKTQQTDENYRKMLFKEALRSGFYELQLARDKYRELCGANG 844
            .|:.:||.|...||||:||:||:|....:||::|.:|::||||:|||:|.|.|:|||||| ...|
Zfish   780 ANQDNLRTGPADTFNDRVFISEMNSGIIKTDQHYERMMYKEALKSGFFEFQAAKDKYREL-AIEG 843

  Fly   845 MHEDLVLEFIRRQALLVSPICPHMAEHVWGLLGNKESIVHARWPEVGAINEVDILCSEYLMEAAH 909
            ||:|||.:||..|.||::|||||:.||.|.|||...:::.|:||..|.::|:.|..|:|||:.||
Zfish   844 MHKDLVFQFIENQTLLLAPICPHLCEHTWSLLGKSSTVMKAQWPTAGPVDEILIRSSQYLMDTAH 908

  Fly   910 SFRLNLKNLLQ-IKGKAGKDKSVNVQAAKPNRGLVWVAKTYPPWQCCVLDTM-KELFNKSQALPD 972
            ..||.||...| .|||.|.:|    ..|||....::|||||||||...|..: |...:.:.||||
Zfish   909 DLRLRLKAYTQPAKGKKGDNK----PPAKPTHCTIYVAKTYPPWQHSALSLLGKHYKSNNGALPD 969

  Fly   973 NKVIAATLQQKAELKKFMKRVMPFAQMIREKVESGKGVAALAVTLEFDERQVLISNLEYLKNTLD 1037
            |||||..|....||||:|||||||..||::.:|. .|...|.:.||||||.||:.|:.||.|:|:
Zfish   970 NKVIAMELGAMPELKKYMKRVMPFVAMIKDNLEK-NGPRVLDLELEFDERAVLLENIVYLTNSLE 1033

  Fly  1038 LDVLEIKYTDDPSAPEKTREEVRPGSPFISFSVAPNVSVELTNPIERSSLFQVNTVISEGDTVQS 1102
            ||.:::.:..:  |.||.:|:..||.||..|...|.|.:.|.||...:.||.....|.:||:..|
Zfish  1034 LDQIDVVFASE--ADEKVKEDCCPGKPFCVFRSEPGVIISLVNPQPSNGLFSTKIDIRQGDSKDS 1096

  Fly  1103 LREKLSKI-IGLKTDAATLKIWRYEDPVLGPRKIPNFEDYKAGK-SVLGEGNFVLDVENKKVSLE 1165
            :..:||:: .|:| |.:.:|:.||||||||||:||.....:.|| .|.....|.:.::..||.:.
Zfish  1097 IIRRLSRVNRGIK-DLSKVKLMRYEDPVLGPRRIPVLGKEEEGKLPVSNSSVFHISLQESKVHMS 1160

  Fly  1166 QAGKLTEVGRNLIYVV 1181
            ..|...::|..|||:|
Zfish  1161 DNGLKVDIGDTLIYLV 1176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeuRSNP_001285589.1 PLN02959 1..1068 CDD:215518 657/1069 (61%)
nt_trans 47..>204 CDD:294020 105/157 (67%)
LeuRS_core <525..758 CDD:173906 161/232 (69%)
Anticodon_Ia_Leu_AEc 756..876 CDD:153413 70/119 (59%)
lars1bXP_698279.6 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582836
Domainoid 1 1.000 286 1.000 Domainoid score I1569
eggNOG 1 0.900 - - E1_COG0495
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7083
Inparanoid 1 1.050 921 1.000 Inparanoid score I350
OMA 1 1.010 - - QHG62150
OrthoDB 1 1.010 - - D131349at33208
OrthoFinder 1 1.000 - - FOG0004267
OrthoInspector 1 1.000 - - oto39987
orthoMCL 1 0.900 - - OOG6_101014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1447
SonicParanoid 1 1.000 - - X3006
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.700

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