DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and AT3G45220

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_190108.1 Gene:AT3G45220 / 823658 AraportID:AT3G45220 Length:393 Species:Arabidopsis thaliana


Alignment Length:408 Identity:99/408 - (24%)
Similarity:174/408 - (42%) Gaps:80/408 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LGKFKLNLLELVMDKAE---------SNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVD- 74
            |||...|..::::..|:         ||.:.||:.|.:.:.:|..|:...|.|::.|.:.||.. 
plant     3 LGKSMENQTDVMVLLAKHVIPTVANGSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSD 67

  Fly    75 -VTEMAKKYERIMSNFQKHNGLRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKDPL--SQRKASN 136
             :..:..|...:..|    :|:..:: |:::..|.|..|.:...|.:|    ||.|  |.....|
plant    68 YLNAVLAKTVSVALN----DGMERSD-LHLSTAYGVWIDKSLSFKPSF----KDLLENSYNATCN 123

  Fly   137 SISFS---------------IHRKSHKGM--RTISNDHNLQINES-AVLVNTVYYSGAWKTRFSK 183
            .:.|:               :|.   .|:  ..:|:|....|.|| .:|.|.||:.|||..:|..
plant   124 QVDFATKPAEVINEVNAWAEVHT---NGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDA 185

  Fly   184 KDTKLKVFHGDHNKKVYVRMMSHVGRFRIADHSYGQIIEMPF--DNSDLSMII-------GLPLH 239
            |.||...||......|.|..|::..:..:..:...:::.:|:  |....:|.|       |||  
plant   186 KLTKSYDFHLLDGTMVKVPFMTNYKKQYLEYYDGFKVLRLPYVEDQRQFAMYIYLPNDRDGLP-- 248

  Fly   240 NTYLSSIEKILRTLSESLVENNVHVE---LPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLT 301
             |.|..|....|.|...:....:..|   :||||..::.:..:.||::|:.|.|::     |.||
plant   249 -TLLEEISSKPRFLDNHIPRQRILTEAFKIPKFKFSFEFKASDVLKEMGLTLPFTH-----GSLT 307

  Fly   302 N-------------GTGAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFV 353
            .             .....:::|.||:.||::|.|  |..|:....|:.|.......|..:.||:
plant   308 EMVESPSIPENLCVAENLFVSNVFHKACIEVDEEG--TEAAAVSVASMTKDMLLMGDFVADHPFL 370

  Fly   354 FLIRDKHT--VYFRGRVV 369
            |.:|::.:  :.|.|:|:
plant   371 FTVREEKSGVILFMGQVL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 96/403 (24%)
AT3G45220NP_190108.1 plant_SERPIN 8..390 CDD:238998 96/403 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.970

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