DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and AT2G35580

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_181101.1 Gene:AT2G35580 / 818123 AraportID:AT2G35580 Length:374 Species:Arabidopsis thaliana


Alignment Length:381 Identity:81/381 - (21%)
Similarity:156/381 - (40%) Gaps:93/381 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IASPLCIEIGISMILMGAKG--TTAEELRSVLDLPVDVTEMAKKYE---RIMSNFQKHNG--LRF 97
            :.:|| |.:.:|:|...:.|  .||:::.|:|.........|...|   .::::.....|  :..
plant    31 LTAPL-INVILSIIAASSPGDTDTADKIVSLLQASSTDKLHAVSSEIVTTVLADSTASGGPTISA 94

  Fly    98 TNWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRKASNSISFSIHRKSHKGMRTISNDHNLQIN 162
            .|.|::.:|..|...:..|:.:::.|          |.|.:.|          ||.:::.|.::|
plant    95 ANGLWIEKTLNVEPSFKDLLLNSYKA----------AFNRVDF----------RTKADEVNREVN 139

  Fly   163 -------------------ESA-----VLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRM 203
                               :||     :..|.::::|.|.::|....||...||.....||.|..
plant   140 SWVEKQTNGLITNLLPSNPKSAPLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPF 204

  Fly   204 M-------SHVGR-FRIADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTLSESLVEN 260
            |       :||.. |::.:..|.:..|   |:...||.|.||.....|.|:.:.|.:....|.:|
plant   205 MTGASCRYTHVYEGFKVINLQYRRGRE---DSRSFSMQIYLPDEKDGLPSMLERLASTRGFLKDN 266

  Fly   261 NV---------HVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSF 316
            .|         .:::|:||..:..|..|:||..|:.:                  .::.::|||.
plant   267 EVLPSHSAVIKELKIPRFKFDFAFEASEALKGFGLVV------------------PLSMIMHKSC 313

  Fly   317 IEINERGA-STGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGRVV 369
            ||::|.|: :...|:......::.......|..:.||:|::::..:  |.|.|:|:
plant   314 IEVDEVGSKAAAAAAFRGIGCRRPPPEKHDFVADHPFLFIVKEYRSGLVLFLGQVM 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 80/378 (21%)
AT2G35580NP_181101.1 plant_SERPIN 8..371 CDD:238998 81/381 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.160

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