DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and CCP3

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_180096.3 Gene:CCP3 / 817062 AraportID:AT2G25240 Length:385 Species:Arabidopsis thaliana


Alignment Length:392 Identity:95/392 - (24%)
Similarity:174/392 - (44%) Gaps:48/392 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NNKIKYLVLLLIATSVLGKFKLNLLELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSV 68
            |:.:..|...:|||...|               ||.:.||:.|.:.:|:|..|:...|.|::.|.
plant    11 NDVVVRLTKHVIATVANG---------------SNLVFSPISINVLLSLIAAGSCSVTKEQILSF 60

  Fly    69 LDLPVDVTEMAKKYERIMSNFQKHNGLRFT--NWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQ 131
            |.|| ....:.....:|:....:.:.||.:  |.:::::.:.::..:..|:::::.|........
plant    61 LMLP-STDHLNLVLAQIIDGGTEKSDLRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFA 124

  Fly   132 RKASNSIS-----FSIHRKSHKGM--RTISNDHNLQINESA-VLVNTVYYSGAWKTRFSKKDTKL 188
            .|.|..|.     ..:|.   .|:  :.:|.|....|..|. ||.|.||:.|||.::|....||.
plant   125 SKPSEVIDEVNTWAEVHT---NGLIKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKK 186

  Fly   189 KVFHGDHNKKVYVRMMSHVGRFRIADHSYGQIIEMPF--DNSDLSMIIGLPLHNTYLSS-IEKIL 250
            ..||......|.|..|::.....:..:...:::.:|:  |....||.|.||.....|:. :||| 
plant   187 NDFHLLDGTSVKVPFMTNYEDQYLRSYDGFKVLRLPYIEDQRQFSMYIYLPNDKEGLAPLLEKI- 250

  Fly   251 RTLSESLVENNVHV--------ELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLL---TNGT 304
             ....|..:|::.:        .:||||..::....|.||.:|:...|:|...|:.::   :||.
plant   251 -GSEPSFFDNHIPLHCISVGAFRIPKFKFSFEFNASEVLKDMGLTSPFNNGGGLTEMVDSPSNGD 314

  Fly   305 GAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGR 367
            ...::.::||:.||::|.|......|....|. ...|.:..|..:|||:|.:|:..:  :.|.|:
plant   315 DLYVSSILHKACIEVDEEGTEAAAVSVGVVSC-TSFRRNPDFVADRPFLFTVREDKSGVILFMGQ 378

  Fly   368 VV 369
            |:
plant   379 VL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 88/371 (24%)
CCP3NP_180096.3 plant_SERPIN 8..382 CDD:238998 95/392 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.970

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