DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and si:ch211-186e20.7

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_021329695.1 Gene:si:ch211-186e20.7 / 566630 ZFINID:ZDB-GENE-110407-6 Length:410 Species:Danio rerio


Alignment Length:382 Identity:88/382 - (23%)
Similarity:173/382 - (45%) Gaps:46/382 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FKLNLLELVM---DKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVL---DLPVDVTEMAKK 81
            |..:|.:.|:   |....|...||..:.|.:|.:.:||.|.|.::|.|.:   .......||.:.
Zfish    43 FAFHLYKRVIESPDYQSKNIFFSPFSVSIALSELSLGAGGDTKQQLLSGIGYNSTTFSTEEMHQL 107

  Fly    82 YERIMSNFQKHNGLRFT--NWLYVNETYEVRQDYNTLMKSTFMAEG-------KDPLSQRKASNS 137
            :..::.:.....|:...  ..||.::.::....:...||..:.::|       |:.:.|   .|:
Zfish   108 FHSLLEDIGNRTGVDIDVGTALYASDRFKPHSKFLEDMKEFYHSDGFTVDFRVKETVDQ---INN 169

  Fly   138 ISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVR 202
            .:    :|..:|....:.| :|:.:....|:..:|:.|.|...|..:.|:...||.|....|.|:
Zfish   170 YA----KKKTQGKFNQAVD-DLEEDTLMFLLTYIYFKGKWDKPFKPEKTRESTFHIDDKTTVPVQ 229

  Fly   203 MMSHVGRFRI---ADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTLS--------ES 256
            ||....|.::   |:.| .:::.:.:.:| .||.:.:|.......:|:.:..|:|        .|
Zfish   230 MMHQYERLKVFYDAELS-TKVLCLDYKDS-FSMFLAVPDDKMEHKNIKDLEMTVSRQHFEKWRRS 292

  Fly   257 LVENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKI--NHVVHKSFIEI 319
            ..:..|.:.:||..:|....|.:.||.:|:..:||:.::.:|:    :..||  :.|:||:.::|
Zfish   293 AFKKTVDIYVPKLSLKTSYSLKDILKGMGMADMFSDKANFTGV----SEEKIFVSKVLHKATLDI 353

  Fly   320 NERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDK--HTVYFRGRVVRLPNE 374
            :|:|.:....:..:..::.....|. .|.||||:..|.|:  ..:.|.|:||. |||
Zfish   354 DEQGTTAAAVTGVSMRVRLHNPLSI-LKFNRPFMVFITDQTNDNILFFGKVVN-PNE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 83/374 (22%)
si:ch211-186e20.7XP_021329695.1 alpha-1-antitrypsin_like 39..403 CDD:239011 83/374 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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