DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpina10a

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001038536.2 Gene:serpina10a / 565064 ZFINID:ZDB-GENE-041014-246 Length:391 Species:Danio rerio


Alignment Length:403 Identity:100/403 - (24%)
Similarity:190/403 - (47%) Gaps:57/403 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KIKYLVLL----LIATSVLGK-------------FKLNLLELVMDKAESNFIASPLCIEIGISMI 53
            |:.:..||    |::.||||:             |...|...:...::.|...|.|...:.::.:
Zfish     2 KMGFFTLLIEASLLSVSVLGQTTDVEELAIKNADFATRLYSKIASSSDDNVAVSTLGATLALATL 66

  Fly    54 LMGAKGTTAEELRSVLDLPVDVTEMAK--KYERIMSNFQK---------HNGLRFTNWLYVNETY 107
            ..||.|.|..||..    .:.|..|.|  :.|||.:..|:         ..||.....:..::::
Zfish    67 AAGAGGATQSELLQ----GIGVDSMVKDGEQERIQNILQQLREDAAQIPATGLFIKQDVKADDSF 127

  Fly   108 --EVRQDYNTLMKSTFMAEGKDPLSQRKASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNT 170
              :|:|.||..:::...|.|      ::|..||:..:..::.:.:|.:.  .|:.....|:|::.
Zfish   128 SNQVKQYYNADVQNVNYANG------QQAKGSINDYVRGRTGEKVRDVV--ENVDPQSMAILISA 184

  Fly   171 VYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGRFRIA-DHSYG-QIIEMPFDNSDLSMI 233
            .:::|.|...|:...|:...|:.:....|.|.||...|::.:| |.::. .|:::|.:|. ::|:
Zfish   185 AFFTGQWLQPFNATFTQEDRFYVNKYNIVQVPMMLRSGKYYLAYDPTFKVGILKLPCENG-IAML 248

  Fly   234 IGLP---LHNTYL--SSIEKILRTLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNT 293
            :.||   :..||:  |...::.|.....|.:..:.::||:|.:|....|..||..||:..||.||
Zfish   249 VLLPDEDVDYTYVDESMTGEVFRGWVAKLKKTKLEIQLPRFSLKQSNSLSVSLPSLGVKEIFGNT 313

  Fly   294 SDLSGLLTNGTGAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRD 358
            ::|:| :::..|.|::.|..|..::::|.|.|..|||.:........|.:    .||||:|::..
Zfish   314 ANLTG-ISSSEGLKLSEVEQKVAVDVDESGGSLAEASGNLFMNPLPPRLT----FNRPFIFVVYH 373

  Fly   359 KHT--VYFRGRVV 369
            :.|  :.:.||||
Zfish   374 EVTKCILYIGRVV 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 89/380 (23%)
serpina10aNP_001038536.2 Serpin 33..388 CDD:278507 92/372 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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