DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpini2

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001015754.1 Gene:serpini2 / 548471 XenbaseID:XB-GENE-980167 Length:410 Species:Xenopus tropicalis


Alignment Length:373 Identity:105/373 - (28%)
Similarity:178/373 - (47%) Gaps:38/373 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLELVMDKA--------ESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLP--VDVTEMA-- 79
            :.||.:|.:        |.|.|.|||...:.:.||.:||:|....:::..|.|.  .|..|.:  
 Frog    31 ITELAVDLSRAIHSSCTEENIIFSPLGTSLILGMIKLGARGAALSQIQQALKLQGNQDSEEFSEL 95

  Fly    80 KKYERIMSNFQKHNGLRFTNWLYVNETYEVRQDYNTLMKSTFMAEGK--DPLSQRKASNSISFSI 142
            |....::|...|.......|.||:.|.::|::.|....:..|.:..|  |....:.::.:||..:
 Frog    96 KTLLAVISEENKEFTFNLANALYLQEGFQVKEQYLHSNRDVFNSAIKLVDFQDVKASAETISEWV 160

  Fly   143 HRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMM--- 204
            .|::|..:..:.:..:.......||||.:|:.|.||.:||.:.|..:.|.......|.|.||   
 Frog   161 QRQTHGKISKMFSSGDFTPLTKMVLVNALYFKGEWKQKFSVEATHSEEFSVKRGLTVKVPMMHLQ 225

  Fly   205 --SHVGRFRIADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKI-----LRTLSESLVENNV 262
              :.:|.|.:.:.|| :::|:|:.....|:::.||..:..:..:|||     ::|....:.|..|
 Frog   226 TTTKLGYFSVKNASY-KVLELPYKGDKFSLLLTLPAEDVEIGELEKIVTATMIKTWFADMKEEVV 289

  Fly   263 HVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFIEINERG---- 323
            .:.||:||::::.:|.:|...|.|..||:...|||| :|......|:.|..|.|:||||.|    
 Frog   290 EISLPRFKVEHKIDLKKSFLNLNITDIFNEGCDLSG-ITESPNLYISKVFQKVFLEINEEGSEAA 353

  Fly   324 ASTGEASDHAESIQKKTRASTSFKVNRPFVFLIR--DKHTVYFRGRVV 369
            ||||      ..:...:.:|..|..||||:|.||  ....:.|.|:|:
 Frog   354 ASTG------MQVSAMSMSSHRFAANRPFLFFIRHIQSGMILFMGKVM 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 104/370 (28%)
serpini2NP_001015754.1 serpin 28..397 CDD:393296 105/373 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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