DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpind1

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:405 Identity:106/405 - (26%)
Similarity:190/405 - (46%) Gaps:68/405 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QGNNKIKYLVLLLIATSVLGKFKLNLLELVMDK--AESNFIASPLCIEIGISMILMGAKGTTAEE 64
            ||..:::.|.:      :...|..||...:.:.  |..|.:.:|:.|...::.|.:|.||...::
 Frog   104 QGKTRVQRLSI------INANFGFNLYRAIKNNTDASDNILLAPVGISTAMATISLGTKGQALDQ 162

  Fly    65 LRSVLDLPVDVTEMAKKYERIMSN----------FQKHNG--LRFTNWLYVNETYEVRQDYNTLM 117
            :...|... :....:.|||.:..:          |:::.|  ||..|.:||.:.:.:|:.:...:
 Frog   163 VLFTLGFK-NFINASSKYEILTLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDFVIREPFKNNL 226

  Fly   118 KSTFMAE-------GKDPLSQRKASNSISFSIHRKSHKGM--RTISN-DHNLQINESAVLVNTVY 172
            |:.:.||       .||.|:  ||:..|     ::..||:  ..::| |..|.:    :|||.:|
 Frog   227 KNYYFAEAQMVDFGSKDFLT--KANKRI-----QQLTKGLIKEALTNVDPALLM----LLVNCIY 280

  Fly   173 YSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGRFRI-ADHSYG-QIIEMPFDNSDLSMIIG 235
            :.|.|:.:|..:.|:...|..:..:.|.|.||...|.|.: ||.... .::::|: ..::||:|.
 Frog   281 FKGTWENKFPVEYTQNMNFRLNEKELVKVPMMKTKGNFLVAADPELDCAVLQLPY-VGNISMLIV 344

  Fly   236 LPLHNTYLSSIEKILRTLSESLVE--NNV------HVELPKFKIKYQTELVESLKKLGIHLIFSN 292
            || |.  ||.::.:.:.:|..:||  .|:      .|.||:||::....|.|.|..:|:..:|::
 Frog   345 LP-HK--LSGMKLLEKQISPQVVERWQNIMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLFTH 406

  Fly   293 TSDLSGLLTNGTGAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTS--FKVNRPFVFL 355
             .|.||:  :.....|....|:..|.:||.|.   ||:  |.::......||.  |..:|||:||
 Frog   407 -GDFSGV--SDKNMNIGLFQHQGTITVNEEGT---EAA--AVTVVGFMPLSTQARFVADRPFLFL 463

  Fly   356 IRDKHT--VYFRGRV 368
            |.:..|  :.|.|||
 Frog   464 IYEHRTNCLIFMGRV 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 101/383 (26%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 106/405 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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