DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Spn55B

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:372 Identity:104/372 - (27%)
Similarity:195/372 - (52%) Gaps:36/372 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KFKLNLLELV-MDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVL----DLPVDVTEMAKK 81
            :|...|.:|: ....:.|.:.||..|:..|::...|::|.||:|:...|    :.|   .|:|:.
  Fly    14 RFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFP---PEVAQT 75

  Fly    82 YERIMSNFQKHNGLRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKD---PLSQRKASNSISFSIH 143
            ::.::..::..|.||..|.|||.|..:::..|.:.:|..:.:|.:.   .|:. .|:.:|:..::
  Fly    76 FQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALND-AAAQAINAWVN 139

  Fly   144 RKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVG 208
            .|:...:..:.:..:...|...||:|.:::.|:|..:||::.|:..:|.....::|.:..|:...
  Fly   140 AKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKA 204

  Fly   209 RFRIADHSYG-------QIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRT-----LSESLVENN 261
            :|     :||       ..:|||:.:|||||.:.||...|.:.::.:.|:|     |::.|....
  Fly   205 KF-----NYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEE 264

  Fly   262 VHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFIEINERGAST 326
            |||:.||||:.|..||.|.||:|||..:|::.::.|.||.:..|..::.|:||:.||:||.|...
  Fly   265 VHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEA 329

  Fly   327 GEASDHAESIQKKTRAST---SFKVNRPFVFLIRDKHTVYFRGRVVR 370
            ..|:    .:...||..|   .|:.:|||:::|.:|..:.|.|..|:
  Fly   330 AAAT----GMIMMTRMMTFPLQFQADRPFLYVIWNKKNILFAGAFVK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 103/368 (28%)
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 103/368 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446411
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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