DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpinb1

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001011419.1 Gene:serpinb1 / 496899 XenbaseID:XB-GENE-1217264 Length:377 Species:Xenopus tropicalis


Alignment Length:383 Identity:100/383 - (26%)
Similarity:179/383 - (46%) Gaps:46/383 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TSVLGKFKLNLLELVMD-KAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAK 80
            :|....|..:|...:.: .|..|...||:.|...::|:|:||:|.||:::..:|.... |.::..
 Frog     5 SSACTHFSFDLFRKINENNATGNVFFSPISISTALAMVLLGARGNTAQQISRILHFDA-VKDLHS 68

  Fly    81 KYERIMSNFQKHN----GLRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRKASNSISF- 140
            .::.:.:...|.|    .|...|.|:..::::...|:.:.:|..:.|:          ..::.| 
 Frog    69 NFQTLNAEINKKNVSSYALNLANRLFGEKSFKFLPDFLSSVKKQYNAD----------LGTVDFI 123

  Fly   141 SIHRKSHKGMRT-ISNDHNLQINE-----------SAVLVNTVYYSGAWKTRFSKKDTKLKVFHG 193
            |....:.|.:.| :|.....:|.|           ..||||.:|:.|.|..:|..:.||...|..
 Frog   124 SAAEDARKEINTWVSEQTKGKIPEVLSAGAVNSFTKLVLVNAIYFKGDWAKKFKAEHTKDMPFQL 188

  Fly   194 DHNKKVYVRMMSHVGR--FRIADHSYGQIIEMPFDNSDLSMIIGLPLH----NTYLSSIEKIL-- 250
            :..::..|:||..:.:  |........:::|:|:.:.:|||:|.||.:    .|.|..:||.|  
 Frog   189 NKKEQKTVKMMYQMEKLPFNYIPEINCRVLELPYVDYELSMVIVLPDNINDDTTGLQQLEKELSL 253

  Fly   251 ---RTLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIF-SNTSDLSGLLTNGTGAKINHV 311
               ...:|:::..:|||.|||||::...:|...|..:|:..:| :.::|||| ::......::.|
 Frog   254 EKINEWTENMMPIDVHVHLPKFKLEDSYKLKSQLAGMGMADLFEAGSADLSG-MSGSNDLYLSEV 317

  Fly   312 VHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGR 367
            :||||:|:||.|.....||  |............|..|.||:|.||...|  :.|.||
 Frog   318 IHKSFVEVNEEGTEAAAAS--AGIAMMCLMREEEFNANHPFLFFIRHNATKSILFFGR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 99/378 (26%)
serpinb1NP_001011419.1 SERPIN 4..377 CDD:294093 100/383 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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