DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpinb1

DIOPT Version :10

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001002653.1 Gene:serpinb1 / 436926 ZFINID:ZDB-GENE-040718-400 Length:380 Species:Danio rerio


Alignment Length:372 Identity:106/372 - (28%)
Similarity:179/372 - (48%) Gaps:34/372 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FKLNLLE-LVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIM 86
            |.|:|.. |....||.|...|||.|...:||:.:||:|.||.|:..||... .|:::...:|.::
Zfish    11 FALDLYRALSASSAEGNIFFSPLSISAALSMVYLGARGDTAGEMEKVLSFS-SVSDVHSHFESLI 74

  Fly    87 SNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMA--EGKDPLSQRKASNS-ISFSIHRK 145
            |:....:.   ||..|.||..:|:....:|.:...:.:.|  :..|.:...:.|.. |:..:..:
Zfish    75 SSINSPSASYILRLANRLYGEKTFSFLPEYLSSSLNLYHADLQAVDFIGASEQSRQLINKWVEEQ 139

  Fly   146 SHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGRF 210
            :...:|.:.....:.......|||.:|:.|.|..||:.:|||...|..:..:...|:||....:|
Zfish   140 TENKIRDLLKPGMVTGMTRLALVNAIYFKGNWLQRFNAQDTKEMPFKINQKENRPVQMMYQKKKF 204

  Fly   211 ---RIADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTLSESLVE--------NN--- 261
               .|.||.. |::|:|:...:|||:|.|| ..|...| :.:|:..||..::        ||   
Zfish   205 PFNYIYDHRV-QVLELPYVKEELSMLILLP-EETQDGS-DPLLKLESELTIDKLHEWTNRNNMDT 266

  Fly   262 ---VHVELPKFKIKYQTELVESLKKLGIHLIF-SNTSDLSGLLTNGTGAKINHVVHKSFIEINER 322
               :.|.||:||::.::.|||.|..:|:..:| ...:||:|:..:| |..::.|.||:|:::||.
Zfish   267 QTDIIVHLPRFKLEIESSLVEILMGMGMSSVFQEGKADLTGMTGHG-GLFLSAVAHKAFVDVNEE 330

  Fly   323 GASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGR 367
            |.....|:  |..:.........|..:.||:|.||...|  :.|.||
Zfish   331 GTEAAAAT--AAIVAFCMLREEHFMADHPFLFYIRHNPTNSILFFGR 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 106/372 (28%)
serpinb1NP_001002653.1 serpinB1_LEI 1..379 CDD:381028 106/372 (28%)

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