DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpinb1

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001002653.1 Gene:serpinb1 / 436926 ZFINID:ZDB-GENE-040718-400 Length:380 Species:Danio rerio


Alignment Length:372 Identity:106/372 - (28%)
Similarity:179/372 - (48%) Gaps:34/372 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FKLNLLE-LVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIM 86
            |.|:|.. |....||.|...|||.|...:||:.:||:|.||.|:..||... .|:::...:|.::
Zfish    11 FALDLYRALSASSAEGNIFFSPLSISAALSMVYLGARGDTAGEMEKVLSFS-SVSDVHSHFESLI 74

  Fly    87 SNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMA--EGKDPLSQRKASNS-ISFSIHRK 145
            |:....:.   ||..|.||..:|:....:|.:...:.:.|  :..|.:...:.|.. |:..:..:
Zfish    75 SSINSPSASYILRLANRLYGEKTFSFLPEYLSSSLNLYHADLQAVDFIGASEQSRQLINKWVEEQ 139

  Fly   146 SHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGRF 210
            :...:|.:.....:.......|||.:|:.|.|..||:.:|||...|..:..:...|:||....:|
Zfish   140 TENKIRDLLKPGMVTGMTRLALVNAIYFKGNWLQRFNAQDTKEMPFKINQKENRPVQMMYQKKKF 204

  Fly   211 ---RIADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTLSESLVE--------NN--- 261
               .|.||.. |::|:|:...:|||:|.|| ..|...| :.:|:..||..::        ||   
Zfish   205 PFNYIYDHRV-QVLELPYVKEELSMLILLP-EETQDGS-DPLLKLESELTIDKLHEWTNRNNMDT 266

  Fly   262 ---VHVELPKFKIKYQTELVESLKKLGIHLIF-SNTSDLSGLLTNGTGAKINHVVHKSFIEINER 322
               :.|.||:||::.::.|||.|..:|:..:| ...:||:|:..:| |..::.|.||:|:::||.
Zfish   267 QTDIIVHLPRFKLEIESSLVEILMGMGMSSVFQEGKADLTGMTGHG-GLFLSAVAHKAFVDVNEE 330

  Fly   323 GASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGR 367
            |.....|:  |..:.........|..:.||:|.||...|  :.|.||
Zfish   331 GTEAAAAT--AAIVAFCMLREEHFMADHPFLFYIRHNPTNSILFFGR 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 106/372 (28%)
serpinb1NP_001002653.1 SERPIN 5..379 CDD:294093 106/372 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.930

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