DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Spn100A

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster


Alignment Length:589 Identity:95/589 - (16%)
Similarity:178/589 - (30%) Gaps:255/589 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LIATSVLGKFKLNLLELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEM 78
            |||..:| ||..::        ::|.:.|||.:...::|:...::|.|..|...|...|.|.|::
  Fly    39 LIALQLL-KFNKDI--------DANQVHSPLGVASILAMLAEASEGDTYSEFEQVFGYPKDRTKL 94

  Fly    79 AKKYERIMSNFQKHNGL----RFTNWLYVNETYEVRQDYNTLMKSTFMAEGKD------------ 127
            ...|:||:.::|..:..    .|..|||:......|:::..|::..:..:.||            
  Fly    95 RDAYKRILGSYQNRDAAVALPSFQTWLYIYRNNSAREEFKDLLEKHYYVDVKDISRQEYDWNEPN 159

  Fly   128 ----------------------------------------------------------------- 127
                                                                             
  Fly   160 TSLQLSEEKDNTDSTEGSTEQSNSKDVIGFETLKRIKLDDEDIPAIPSDGYGQEIIDKEASKFDR 224

  Fly   128 ----------PLSQRKA---------------------SNSISFSIHRKSHKGMRTISND----- 156
                      |::|.:|                     ..:.:.|:.::....|....|.     
  Fly   225 DVDDKQYVEKPVAQAEAELLQKEQKQQATTESELESQPEETTTLSVEKQEKPDMAAEENPAEKQQ 289

  Fly   157 -----------HNLQINESA--------------------------------------------- 165
                       .||:.||:.                                             
  Fly   290 NKRSDQEESQIKNLEENETVQEEEKLAKIMAAPALTAGEPEKVRLPLQKLENAVKTAAKDGADEI 354

  Fly   166 ----------------------------------------------VLVNTVYYSGAWKTRFSK- 183
                                                          :|.|.:||.|:|...|.: 
  Fly   355 MLALESHLPSVSRVNGARSLFQQDDITSALSANSITGRSAGSKSKMLLFNGLYYRGSWANPFYQL 419

  Fly   184 KDTKLKVFHGDHNKKVYVRMMSHVGRFRIAD--HSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSI 246
            :|...:.|...:...|...||...|:|::||  ....:::.:|::.|..::.|.||.....||.:
  Fly   420 RDGSDEFFFMTNEDAVKAPMMHARGKFQVADLPQVKARVLSLPYETSRYALCIVLPDETEGLSDV 484

  Fly   247 EKILRTLSESLVE-----NNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGA 306
            ...|:|....|.:     ..:|:.:|||:::..:.....||::|:..:||.|.....||:.....
  Fly   485 ISQLQTSDFLLAKKQFQMKELHISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSLLSEDPDV 549

  Fly   307 KINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTS-----------------FKVNRPFVF 354
            .::.:|....:.::|.|:|....|  |.::|.:|.:..|                 |:|||||.:
  Fly   550 HVDEIVQFVNVRVDEGGSSANSLS--AATMQARTPSVESTVLPVPEPEPELPGVERFEVNRPFAY 612

  Fly   355 LIRD 358
            .|.|
  Fly   613 FIVD 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 91/581 (16%)
Spn100ANP_651818.1 SERPIN 41..>148 CDD:294093 27/115 (23%)
SERPIN <380..628 CDD:294093 55/239 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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