DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Db and Spn77Bc

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster


Alignment Length:407 Identity:99/407 - (24%)
Similarity:180/407 - (44%) Gaps:63/407 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NKIKYLVLLLIATSVLGKFKLNLLELVMDKAES------NFIASPLCIEIGISMILMGAKGTTAE 63
            |.:....||...|....:|.||||::     ||      ||..:|......:.|...||:|||.:
  Fly    22 NTVDTKSLLQKMTDARLQFALNLLQM-----ESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLK 81

  Fly    64 ELRSVLDLPVDVTEMAKKYERIM------SNFQKHNGLRFTNWLYVNETYEVRQDYNTLMKSTFM 122
            ::|.||.:.||...:.:.||.:.      |...|...||:..:..|.: .|:.:.||:::... :
  Fly    82 QIRDVLAIYVDYPTLRRWYEDVRAYHYLNSENTKLFSLRYAYYDDVGD-LELVKGYNSVVLEG-V 144

  Fly   123 AEGKDPLSQRK---------ASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWK 178
            .||...|.:.:         ||..|:..|.:.||..:.:..:..:.....:.:.:...|:...||
  Fly   145 GEGNVVLREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWK 209

  Fly   179 TRFSKKDTKLKVFH---GDHNKKVYVRMMSHVGRFRIADHSYG---QIIEMPFDNSDLSMIIGLP 237
            ..|.|..||::.|:   |....|  |.||...|::...::..|   .::|:||...:|.||:.||
  Fly   210 YPFDKSQTKVEQFYNAGGSPAGK--VEMMVQTGKYAYVNNVKGLQADVLELPFGEHELVMIVILP 272

  Fly   238 LHNTYLS---------SIEKILRTLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNT 293
            ..:..:|         .:.::|..|..|..|::|.|:||||..:....|.:::.:.|:..:.:..
  Fly   273 KPSQRVSLVLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEF 337

  Fly   294 SDLSGLL--TNGTGAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTS--FKVNRPFVF 354
            :||..:|  |...||.::.....:.|.::|.|.        ..::.:|:..:.:  |.:||||.:
  Fly   338 ADLGRMLIPTGDRGAYLSLYHQFARIVVDEEGL--------PNAVPQKSSGTNNIKFHINRPFAY 394

  Fly   355 LIRDK------HTVYFR 365
            |:..:      |:..||
  Fly   395 LVLQRTHKLLIHSGVFR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 95/390 (24%)
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 93/390 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446305
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.