DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpinf1

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_989086.1 Gene:serpinf1 / 394686 XenbaseID:XB-GENE-945026 Length:409 Species:Xenopus tropicalis


Alignment Length:375 Identity:96/375 - (25%)
Similarity:177/375 - (47%) Gaps:41/375 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SVLGKFKLNLLELVMDK-AESNFIASPLCIEIGISMILMGAKGTTAEEL--RSV-LDLPVDVTEM 78
            |....|..:|..:..:| ..||.|.|||.|...:|.:.:|. |...|.|  ||: .||..| .|:
 Frog    46 SSASNFGYDLYRMQANKNPNSNIIISPLSIATSLSSLSLGG-GQRTESLIQRSLYYDLLND-PEV 108

  Fly    79 AKKYERIMSNF-QKHNGLRFTNWLYVNETYEVRQDYNTLMKSTF-----MAEGKDPLSQRKASNS 137
            ...|:.::::| .:.:||:.|..:.:.....:|.|:.|.::..:     :..|...|..::|::.
 Frog   109 HATYKDLLASFTSQASGLKSTWRIMLERRLRLRMDFVTQVEKFYGNKPKVLTGSTRLDLQEANDF 173

  Fly   138 ISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVR 202
            |......|..|..:.|..      :.|.:|:.|.|..|.|..:|:.::|..:.||.|....|.|.
 Frog   174 IQKQTQGKVVKFFKEIPT------SVSILLLGTTYLKGQWAYKFNPRETVQREFHLDEQTSVTVP 232

  Fly   203 MMSHVG---RFRIADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTLSESLVEN---- 260
            |||...   |:.:......:|:::|. ...:|::..||  ||...::..|...|:...|.:    
 Frog   233 MMSSKNIPVRYGLDSDFNCKIVQLPL-TGGVSIMFFLP--NTVTQNLTMIEEGLTSEFVHDIDQA 294

  Fly   261 ----NVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFIEINE 321
                |:.:.:||.|:.|:.||.|:|::..:..:|: |.|.|.:  :....|:::||||:.:|:||
 Frog   295 LQPINLVLSVPKLKLNYEAELKEALQESKLQSLFA-TPDFSKI--SSKPLKLSYVVHKATLELNE 356

  Fly   322 RGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIR--DKHTVYFRGRVV 369
            .||.|....:.:.    :......:.::.||:|::|  |...:.|.|:|:
 Frog   357 EGAETAPKPEDSH----RNYFPLEYHLDHPFLFVLRANDNGALLFIGKVM 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 94/368 (26%)
serpinf1NP_989086.1 serpinF1_PEDF 31..402 CDD:381008 95/373 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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